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5NFJ

Crystal structure of the methyltransferase subunit of human mitochondrial Ribonuclease P (MRPP1) bound to S-adenosyl-methionine (SAM)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Mitochondrial ribonuclease P protein 1polymer20223801.53UniProt (Q7L0Y3)
Pfam (PF01746)
Homo sapiens (Human)Mitochondrial RNase P protein 1,HBV pre-S2 trans-regulated protein 2,RNA (guanine-9-)-methyltransferase domain-containing protein 1,Renal carcinoma antigen NY-REN-49,tRNA methyltransferase 10 homolog C
2D, J, P
(A, B, C)
S-ADENOSYLMETHIONINEnon-polymer398.43Chemie (SAM)
3E, F, G, K, L...
(A, B, C)
GLYCEROLnon-polymer92.17Chemie (GOL)
4H, I, N, O
(A, B)
1,2-ETHANEDIOLnon-polymer62.14Chemie (EDO)
5R, S, T
(A, B, C)
waterwater18.0217Chemie (HOH)
Sequence modifications
A, B, C: 203 - 403 (UniProt: Q7L0Y3)
PDBExternal DatabaseDetails
Met 202-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight71404.6
Non-Polymers*Number of molecules14
Total formula weight2088.2
All*Total formula weight73492.9
*Water molecules are not included.

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PDB entries from 2025-06-11

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