5NEU
Localised Reconstruction of Integrin alpha V beta 6 bound to Foot and Mouth Disease Virus O1 Manisa - Pose B.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | O1 Manisa VP1 | polymer | 208 | 22850.9 | 1 | UniProt (Q6PMW3) Pfam (PF22663) | Foot-and-mouth disease virus | |
| 2 | B (2) | O1 Manisa VP2 | polymer | 218 | 24417.5 | 1 | UniProt (Q6PMW3) Pfam (PF00073) | Foot-and-mouth disease virus | |
| 3 | C (3) | Capsid protein | polymer | 220 | 23933.9 | 1 | UniProt (A0A1C6ZW60) Pfam (PF00073) UniProt (by SIFTS) (Q6PMW3) | Foot-and-mouth disease virus | |
| 4 | D (4) | O1 Manisa VP4 | polymer | 85 | 8766.1 | 1 | UniProt (E1ACS1) Pfam (PF08935) UniProt (by SIFTS) (D1H101) | Foot-and-mouth disease virus | |
| 5 | E (A) | Integrin alpha-V | polymer | 590 | 64937.8 | 1 | UniProt (P06756) Pfam (PF01839) Pfam (PF08441) | Homo sapiens (Human) | Vitronectin receptor subunit alpha |
| 6 | F (B) | Integrin beta-6 | polymer | 470 | 51534.6 | 1 | UniProt (P18564) Pfam (PF00362) Pfam (PF18372) Pfam (PF17205) | Homo sapiens (Human) | |
| 7 | G (1) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 8 | H, I (B) | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) |
Sequence modifications
2: 1 - 218 (UniProt: Q6PMW3)
3: 1 - 220 (UniProt: A0A1C6ZW60)
A: 1 - 594 (UniProt: P06756)
B: 5 - 539 (UniProt: P18564)
| PDB | External Database | Details |
|---|---|---|
| Tyr 93 | Ser 379 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Thr 168 | Ala 471 | conflict |
| Val 174 | Ala 477 | conflict |
| PDB | External Database | Details |
|---|---|---|
| - | Ala 60 | deletion |
| - | Ser 61 | deletion |
| Cys 400 | Met 430 | conflict |
| - | Gln 534 | deletion |
| - | Lys 535 | deletion |
| PDB | External Database | Details |
|---|---|---|
| Cys 249 | Ile 287 | conflict |
| Asn 517 | His 469 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 196440.8 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 104.5 | |
| All* | Total formula weight | 196545.2 |






