5MX0
Crystal structure of human fibromodulin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Fibromodulin | polymer | 362 | 40809.7 | 2 | UniProt (Q06828) Pfam (PF01462) Pfam (PF13855) Pfam (PF13516) Pfam (PF00560) | Homo sapiens (Human) | FM,Collagen-binding 59 kDa protein,Keratan sulfate proteoglycan fibromodulin,KSPG fibromodulin |
| 2 | C, D, E, F, G... (C, D, E, F, G...) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 732.7 | 8 | In PDB GlyTouCan (G32152BH) | |||
| 3 | K, M (A, B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 4 | L, N (A, B) | NICKEL (II) ION | non-polymer | 58.7 | 2 | Chemie (NI) | |||
| 5 | O, P (A, B) | water | water | 18.0 | 566 | Chemie (HOH) |
Sequence modifications
A, B: 18 - 376 (UniProt: Q06828)
| PDB | External Database | Details |
|---|---|---|
| Gly 15 | - | expression tag |
| Ala 16 | - | expression tag |
| Leu 17 | - | expression tag |
| Ser 38 | Tyr 38 | engineered mutation |
| Ser 39 | Tyr 39 | engineered mutation |
| Ser 42 | Tyr 42 | engineered mutation |
| Ser 45 | Tyr 45 | engineered mutation |
| Ser 47 | Tyr 47 | engineered mutation |
| Ser 50 | Tyr 50 | engineered mutation |
| Ser 53 | Tyr 53 | engineered mutation |
| Ser 55 | Tyr 55 | engineered mutation |
| Ser 63 | Tyr 63 | engineered mutation |
| Ser 65 | Tyr 65 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 81619.4 | |
| Branched | Number of molecules | 8 |
| Total formula weight | 5861.5 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 188.3 | |
| All* | Total formula weight | 87669.1 |
