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5MR3

Crystal structure of red abalone egg VERL repeat 2 with linker in complex with sperm lysin at 1.8 A resolution

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C, E, G
(A, C, E, G)
Egg-lysinpolymer13616295.24UniProt (P04552)
Pfam (PF01303)
Haliotis rufescens (California red abalone)Sperm-lysin
2B, D, F, H
(B, D, F, H)
Vitelline envelope sperm lysin receptorpolymer13415089.34UniProt (Q8WR62)
Pfam (PF11386)
Haliotis rufescens (California red abalone)
3AA, I, J, K, M...
(H, A, B, C, D...)
GLYCEROLnon-polymer92.112Chemie (GOL)
4L, V
(B, F)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5BA, N, S, W
(H, B, D, F)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.24Chemie (NAG)Haliotis rufescens
6X, Y
(G)
TRIETHYLENE GLYCOLnon-polymer150.22Chemie (PGE)
7CA, DA, EA, FA, GA...
(A, B, C, D, E...)
waterwater18.0559Chemie (HOH)
Sequence modifications
B, D, F, H: 176 - 298 (UniProt: Q8WR62)
PDBExternal DatabaseDetails
Glu 173-expression tag
Thr 174-expression tag
Gly 175-expression tag
Ala 293Ser 293engineered mutation
Ala 296Ser 296engineered mutation
Ala 297Ser 297engineered mutation
Leu 299-expression tag
Glu 300-expression tag
His 301-expression tag
His 302-expression tag
His 303-expression tag
His 304-expression tag
His 305-expression tag
His 306-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight125538.2
Non-Polymers*Number of molecules20
Total formula weight2361.2
All*Total formula weight127899.4
*Water molecules are not included.

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PDB entries from 2025-06-25

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