5MLU
Crystal structure of the PFV GAG CBS bound to a mononucleosome
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E (A, E) | Histone H3.2 | polymer | 97 | 11405.3 | 2 | UniProt (P84233) Pfam (PF00125) | Xenopus laevis (African clawed frog) | |
2 | B, F (B, F) | Histone H4 | polymer | 84 | 9566.2 | 2 | UniProt (P62799) Pfam (PF15511) | Xenopus laevis (African clawed frog) | |
3 | C, G (C, G) | Histone H2A type 1 | polymer | 105 | 11494.4 | 2 | UniProt (P06897) Pfam (PF00125) Pfam (PF16211) | Xenopus laevis (African clawed frog) | |
4 | D (D) | Histone H2B | polymer | 93 | 10348.9 | 1 | UniProt (A0A1B8Y853) Pfam (PF00125) UniProt (by SIFTS) (P02281) | Xenopus laevis (African clawed frog) | |
5 | H (H) | Histone H2B | polymer | 94 | 10478.0 | 1 | UniProt (A0A1B8Y853) Pfam (PF00125) UniProt (by SIFTS) (P02281) | Xenopus laevis (African clawed frog) | |
6 | I (M) | PFV GAG peptide | polymer | 17 | 1986.2 | 1 | UniProt (by SIFTS) (P14349) | Simian foamy virus | |
7 | J (I) | DNA (145-MER) | polymer | 145 | 44991.7 | 1 | Escherichia coli | ||
8 | K (J) | DNA (145-MER) | polymer | 145 | 44520.4 | 1 | Escherichia coli | ||
9 | L, M, N, O (A, I, J) | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
10 | P, Q, R, S, T... (A, B, C, D, E...) | water | water | 18.0 | 194 | Chemie (HOH) |
Sequence modifications
A, E: 39 - 135 (UniProt: P84233)
C, G: 14 - 118 (UniProt: P06897)
PDB | External Database | Details |
---|---|---|
Ala 102 | Gly 103 | variant |
PDB | External Database | Details |
---|---|---|
Arg 99 | Gly 100 | variant |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 177257.0 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 219.8 | |
All* | Total formula weight | 177476.8 |