5MLC
Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | 23S ribosomal RNA, chloroplastic | polymer | 2811 | 911650.4 | 1 | GenBank (7636084) | Spinacia oleracea (Spinach) | |
| 2 | B | 5S ribosomal RNA, chloroplastic | polymer | 121 | 39014.2 | 1 | GenBank (7636084) | Spinacia oleracea (Spinach) | |
| 3 | C | 4.8S ribosomal RNA, chloroplastic | polymer | 103 | 33330.9 | 1 | GenBank (12299) | Spinacia oleracea (Spinach) | |
| 4 | D | 50S ribosomal protein L2, chloroplastic | polymer | 272 | 29853.6 | 1 | UniProt (P06509) Pfam (PF00181) Pfam (PF03947) In PDB | Spinacia oleracea (Spinach) | Ribosomal protein CS-L4 |
| 5 | E | 50S ribosomal protein L3, chloroplastic | polymer | 305 | 33034.8 | 1 | UniProt (A0A0K9QEC7) Pfam (PF00297) UniProt (by SIFTS) (P82191) In PDB | Spinacia oleracea (Spinach) | |
| 6 | F | 50S ribosomal protein L4, chloroplastic | polymer | 293 | 32479.6 | 1 | UniProt (O49937) Pfam (PF00573) In PDB | Spinacia oleracea (Spinach) | R-protein L4 |
| 7 | G | 50S ribosomal protein L5, chloroplastic | polymer | 220 | 24248.2 | 1 | UniProt (P82192) Pfam (PF00281) Pfam (PF00673) In PDB | Spinacia oleracea (Spinach) | |
| 8 | H | 50S ribosomal protein L6, chloroplastic | polymer | 220 | 24516.7 | 1 | UniProt (A0A0K9R4N9) Pfam (PF00347) UniProt (by SIFTS) (P82193) In PDB | Spinacia oleracea (Spinach) | |
| 9 | I | 50S ribosomal protein L9, chloroplastic | polymer | 196 | 22038.9 | 1 | UniProt (A0A0K9RQ91) Pfam (PF01281) Pfam (PF03948) UniProt (by SIFTS) (P82180) In PDB | Spinacia oleracea (Spinach) | |
| 10 | L | 50S ribosomal protein L13, chloroplastic | polymer | 250 | 28211.6 | 1 | UniProt (P12629) Pfam (PF00572) In PDB | Spinacia oleracea (Spinach) | CL13 |
| 11 | M | 50S ribosomal protein L14, chloroplastic | polymer | 121 | 13484.7 | 1 | UniProt (P09596) Pfam (PF00238) In PDB | Spinacia oleracea (Spinach) | Ribosomal protein CS-L29 |
| 12 | N | 50S ribosomal protein L15, chloroplastic | polymer | 271 | 29081.5 | 1 | UniProt (A0A0K9QHT0) Pfam (PF00828) UniProt (by SIFTS) (P22798) In PDB | Spinacia oleracea (Spinach) | |
| 13 | O | 50S ribosomal protein L16, chloroplastic | polymer | 135 | 15328.1 | 1 | UniProt (P17353) Pfam (PF00252) In PDB | Spinacia oleracea (Spinach) | Ribosomal protein CS-L24 |
| 14 | P | 50S ribosomal protein L17, chloroplastic | polymer | 126 | 14577.2 | 1 | UniProt (A0A0K9RLJ4) Pfam (PF01196) UniProt (by SIFTS) (P82194) In PDB | Spinacia oleracea (Spinach) | |
| 15 | Q | 50S ribosomal protein L18, chloroplastic | polymer | 166 | 18410.2 | 1 | UniProt (A0A0K9QQ60) Pfam (PF00861) UniProt (by SIFTS) (P82195) In PDB | Spinacia oleracea (Spinach) | |
| 16 | R | 50S ribosomal protein L19, chloroplastic | polymer | 233 | 26121.3 | 1 | UniProt (P82413) Pfam (PF01245) In PDB | Spinacia oleracea (Spinach) | CL19 |
| 17 | S | 50S ribosomal protein L20, chloroplastic | polymer | 128 | 15725.7 | 1 | UniProt (P28803) Pfam (PF00453) In PDB | Spinacia oleracea (Spinach) | |
| 18 | T | 50S ribosomal protein L21, chloroplastic | polymer | 256 | 28441.7 | 1 | UniProt (P24613) Pfam (PF00829) In PDB | Spinacia oleracea (Spinach) | CL21,CS-L7 |
| 19 | U | 50S ribosomal protein L22, chloroplastic | polymer | 199 | 23292.7 | 1 | UniProt (P09594) Pfam (PF00237) In PDB | Spinacia oleracea (Spinach) | Ribosomal protein CS-L13 |
| 20 | V | 50S ribosomal protein L23, chloroplastic | polymer | 198 | 21832.2 | 1 | UniProt (Q9LWB5) Pfam (PF00276) In PDB | Spinacia oleracea (Spinach) | PRPL23 |
| 21 | W | 50S ribosomal protein L24, chloroplastic | polymer | 191 | 21481.1 | 1 | UniProt (P27683) Pfam (PF00467) Pfam (PF17136) In PDB | Spinacia oleracea (Spinach) | CL24 |
| 22 | X | 50S ribosomal protein L27, chloroplastic | polymer | 194 | 21366.4 | 1 | UniProt (A0A0K9R4I2) Pfam (PF01016) UniProt (by SIFTS) (P82190) In PDB | Spinacia oleracea (Spinach) | |
| 23 | Y | 50S ribosomal protein L28, chloroplastic | polymer | 148 | 16460.5 | 1 | UniProt (A0A0K9RD02) Pfam (PF00830) UniProt (by SIFTS) (P82245) In PDB | Spinacia oleracea (Spinach) | |
| 24 | Z | 50S ribosomal protein L29, chloroplastic | polymer | 168 | 19083.4 | 1 | UniProt (A0A0K9R7W8) Pfam (PF00831) UniProt (by SIFTS) (P82248) In PDB | Spinacia oleracea (Spinach) | |
| 25 | 2 | 50S ribosomal protein L32, chloroplastic | polymer | 57 | 6651.0 | 1 | UniProt (P28804) In PDB | Spinacia oleracea (Spinach) | |
| 26 | 3 | 50S ribosomal protein L33, chloroplastic | polymer | 66 | 7668.1 | 1 | UniProt (P28805) Pfam (PF00471) In PDB | Spinacia oleracea (Spinach) | |
| 27 | 4 | 50S ribosomal protein L34, chloroplastic | polymer | 152 | 16126.6 | 1 | UniProt (P82244) Pfam (PF00468) In PDB | Spinacia oleracea (Spinach) | CL34 |
| 28 | 5 | 50S ribosomal protein L35, chloroplastic | polymer | 159 | 17376.3 | 1 | UniProt (P23326) Pfam (PF01632) In PDB | Spinacia oleracea (Spinach) | CL35 |
| 29 | 6 | 50S ribosomal protein L36, chloroplastic | polymer | 37 | 4414.5 | 1 | UniProt (P12230) Pfam (PF00444) In PDB | Spinacia oleracea (Spinach) | |
| 30 | 9 | Ribosome-recycling factor, chloroplastic | polymer | 271 | 30477.9 | 1 | UniProt (P82231) Pfam (PF01765) In PDB | Spinacia oleracea (Spinach) | RRF,CpFrr,RRFHCP,Ribosome-releasing factor,chloroplastic |
| 31 | 7 | PSRP5alpha, chloroplastic | polymer | 142 | 15351.2 | 1 | UniProt (P27684) In PDB | Spinacia oleracea (Spinach) | 50S ribosomal protein L40,CL40,Plastid-specific 50S ribosomal protein 5 alpha,PSRP-5 |
| 32 | 8 | PSRP6, chloroplastic | polymer | 116 | 12080.7 | 1 | UniProt (P82411) Pfam (PF17257) In PDB | Spinacia oleracea (Spinach) | CL25,Plastid-specific 50S ribosomal protein 6,PSRP-6 |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 32 |
| Total formula weight | 1573211.9 | |
| All* | Total formula weight | 1573211.9 |
