5MFR
The crystal structure of E. coli Aminopeptidase N in complex with 7-amino-5,7,8,9-tetrahydrobenzocyclohepten-6-one
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Aminopeptidase N | polymer | 891 | 101441.2 | 1 | UniProt (P04825) Pfam (PF17900) Pfam (PF01433) Pfam (PF11940) Pfam (PF17432) In PDB | Escherichia coli (strain K12) | Alpha-aminoacylpeptide hydrolase |
2 | A | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
3 | A | [(7~{S})-6,6-bis(oxidanyl)-5,7,8,9-tetrahydrobenzo[7]annulen-7-yl]azanium | non-polymer | 194.3 | 1 | Chemie (7MK) | |||
4 | A | GLYCEROL | non-polymer | 92.1 | 10 | Chemie (GOL) | |||
5 | A | SODIUM ION | non-polymer | 23.0 | 8 | Chemie (NA) | |||
6 | A | MALONATE ION | non-polymer | 102.0 | 4 | Chemie (MLI) | |||
7 | A | DIMETHYL SULFOXIDE | non-polymer | 78.1 | 2 | Chemie (DMS) | |||
8 | A | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
9 | water | water | 18.0 | 1798 | Chemie (HOH) |
Sequence modifications
A: 1 - 870 (UniProt: P04825)
PDB | External Database | Details |
---|---|---|
Met -20 | - | initiating methionine |
Gly -19 | - | expression tag |
Ser -18 | - | expression tag |
Ser -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
Ser -10 | - | expression tag |
Ser -9 | - | expression tag |
Gly -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 101441.2 | |
Non-Polymers* | Number of molecules | 29 |
Total formula weight | 2035.3 | |
All* | Total formula weight | 103476.5 |