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5M2H

Crystal structure of vancomycin-Zn(II)-citrate complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Vancomycinpolymer71150.02NOR (NOR00681)
BIRD (PRD_000204)
Amycolatopsis orientalis
2C, D
(C, D)
vancosamine-(1-2)-beta-D-glucopyranosebranched323.32In PDB
BIRD (PRD_000204)
GlyTouCan (G14263HU)
3E
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4F, G
(A)
CITRIC ACIDnon-polymer192.12Chemie (CIT)
5H
(B)
HEXAETHYLENE GLYCOLnon-polymer282.31Chemie (P6G)
6I, J
(A, B)
waterwater18.074Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight2300.0
BranchedNumber of molecules2
Total formula weight646.7
Non-Polymers*Number of molecules4
Total formula weight732.0
All*Total formula weight3678.6
*Water molecules are not included.

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PDB entries from 2025-12-03

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