5LW0

Oryza sativa APL macrodomain in complex with ADP-ribose

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B (A, B)	Basic helix-loop-helix, putative, expressed	polymer	231	25386.9	2	UniProt (Q10MW4) Pfam (PF01661) UniProt (by SIFTS) (B8ALM5)	Oryza sativa subsp. japonica (Rice)	APL
2	C, F (A, B)	[(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE	non-polymer		559.3	2	Chemie (AR6) PubChem (192) PubChem (25113622) PubChem (25113623) PubChem (44415180) PubChem (51051599) PubChem (44144391) PubChem (445794) PubChem (447048) PubChem (89379870) PubChem (33576) PubChem (447165) PubChem (448826) PubChem (91746164) PubChem (9548001) PubChem (9547960) PubChem (122606931) PubChem (122609061) PubChem (10437766) PubChem (174159053) PubChem (140853820) PubChem (146879505) PubChem (162774256) PubChem (162782217) PubChem (163972867) PubChem (173750345) PubChem (173750346) PubChem (175675949)
3	D, E, G (A, B)	PHOSPHATE ION	non-polymer		95.0	3	Chemie (PO4) PubChem (1061)
4	H, I (B)	GLYCINE	non-polymer		75.1	2	Chemie (GLY) PubChem (750)
5	J, K (A, B)	water	water		18.0	365	Chemie (HOH)

Sequence modifications

A, B: 78 - 296 (UniProt: Q10MW4)

PDB	External Database	Details
Met 66	-	initiating methionine
Gly 67	-	expression tag
His 68	-	expression tag
His 69	-	expression tag
His 70	-	expression tag
His 71	-	expression tag
His 72	-	expression tag
His 73	-	expression tag
Gly 74	-	expression tag
Gly 75	-	expression tag
Val 76	-	expression tag
Lys 77	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	50773.7
Non-Polymers*	Number of molecules	7
	Total formula weight	1553.7
All*	Total formula weight	52327.4

*Water molecules are not included.