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5LW0

Oryza sativa APL macrodomain in complex with ADP-ribose

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0006281biological_processDNA repair
A0033699molecular_functionDNA 5'-adenosine monophosphate hydrolase activity
B0003677molecular_functionDNA binding
B0006281biological_processDNA repair
B0033699molecular_functionDNA 5'-adenosine monophosphate hydrolase activity
Functional Information from PDB Data
site_idAC1
Number of Residues27
Detailsbinding site for residue AR6 A 301
ChainResidue
APRO106
AGLY174
AASP175
AILE176
AALA193
AALA194
AASN195
AGLY202
AGLY203
AGLY204
AVAL205
ASER107
AARG265
AHOH425
AHOH431
AHOH449
AHOH465
AHOH469
AHOH477
AHOH519
ASER109
ATHR110
AALA111
AASP112
APHE113
AASP144
ALEU145

site_idAC2
Number of Residues7
Detailsbinding site for residue PO4 A 302
ChainResidue
AASP130
ATHR285
AHOH423
AHOH428
AHOH460
AHOH535
AHOH538

site_idAC3
Number of Residues5
Detailsbinding site for residue PO4 A 303
ChainResidue
AASP126
AHIS281
AHOH419
AHOH420
AHOH433

site_idAC4
Number of Residues28
Detailsbinding site for residue AR6 B 301
ChainResidue
BPRO106
BSER107
BSER109
BTHR110
BALA111
BASP112
BPHE113
BASP144
BLEU145
BGLY174
BASP175
BILE176
BALA193
BASN195
BGLY201
BGLY202
BGLY203
BGLY204
BVAL205
BALA208
BARG265
BHOH410
BHOH424
BHOH450
BHOH462
BHOH490
BHOH491
BHOH559

site_idAC5
Number of Residues4
Detailsbinding site for residue PO4 B 302
ChainResidue
BARG119
BILE123
BASP126
BHIS281

site_idAC6
Number of Residues4
Detailsbinding site for residue GLY B 303
ChainResidue
AMET264
BASN165
BARG168
BHOH508

site_idAC7
Number of Residues3
Detailsbinding site for residue GLY B 304
ChainResidue
BGLN114
BASN262
BMET264

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PDB entries from 2024-07-24

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