5LU9
Crystal structure of YVAD-cmk bound human legumain (AEP) in complex with compound 11
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | AC-TYR-VAL-ALA-ASP-CHLOROMETHYLKETONE | polymer | 6 | 525.0 | 1 | BIRD (PRD_002086) | synthetic construct | |
| 2 | B (A) | Legumain | polymer | 263 | 30101.8 | 1 | UniProt (Q99538) Pfam (PF01650) | Homo sapiens (Human) | Asparaginyl endopeptidase,Protease,cysteine 1 |
| 3 | C, D (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 4 | E, F (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 5 | G (A) | 7-(morpholin-4-yl)-2,1,3-benzoxadiazol-4-amine | non-polymer | 220.2 | 1 | Chemie (3Y7) | |||
| 6 | H (A) | water | water | 18.0 | 70 | Chemie (HOH) |
Sequence modifications
A: 26 - 288 (UniProt: Q99538)
| PDB | External Database | Details |
|---|---|---|
| Gln 263 | Asn 263 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 30626.8 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 854.8 | |
| All* | Total formula weight | 31481.5 |
