5LF5
Myelin-associated glycoprotein (MAG) deglycosylated full extracellular domain with co-purified ligand
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Myelin-associated glycoprotein | polymer | 500 | 55193.0 | 1 | UniProt (P20917) Pfam (PF08205) Pfam (PF13927) | Mus musculus (House Mouse) | Siglec-4a |
| 2 | B (B) | alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G86851RC) | |||
| 3 | C (C) | N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-galactopyranose | branched | 674.6 | 1 | In PDB GlyTouCan (G02684WR) | |||
| 4 | D (A) | alpha-D-mannopyranose | non-polymer | 180.2 | 1 | Chemie (MAN) | |||
| 5 | E, F, G, H (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 4 | Chemie (NAG) |
Sequence modifications
A: 20 - 508 (UniProt: P20917)
| PDB | External Database | Details |
|---|---|---|
| Gly 18 | - | expression tag |
| Ser 19 | - | expression tag |
| Ala 509 | - | expression tag |
| Ala 510 | - | expression tag |
| Ala 511 | - | expression tag |
| His 512 | - | expression tag |
| His 513 | - | expression tag |
| His 514 | - | expression tag |
| His 515 | - | expression tag |
| His 516 | - | expression tag |
| His 517 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 55193.0 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 1042.0 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 1065.0 | |
| All* | Total formula weight | 57299.9 |
