5LD1
Crystal Structure of Polyphosphate Kinase from Meiothermus ruber bound to ATP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Polyphosphate:AMP phosphotransferase | polymer | 287 | 33778.3 | 4 | UniProt (A0A0S7ASE9) | Meiothermus ruber | |
| 2 | E, F, I, J, P... (A, B, C, D) | ADENOSINE-5'-TRIPHOSPHATE | non-polymer | 507.2 | 8 | Chemie (ATP) | |||
| 3 | G, K, M, N, R... (A, B, C, D) | MAGNESIUM ION | non-polymer | 24.3 | 7 | Chemie (MG) | |||
| 4 | H, O, U, Y (A, B, C, D) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 5 | L, S (B, C) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 6 | AA, BA, CA, Z (B, C, D, A) | water | water | 18.0 | 874 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 267 (UniProt: A0A0S7ASE9)
| PDB | External Database | Details |
|---|---|---|
| Met -19 | - | initiating methionine |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 135113.4 | |
| Non-Polymers* | Number of molecules | 21 |
| Total formula weight | 4796.0 | |
| All* | Total formula weight | 139909.4 |






