5KOB
Crystal structure of a peptide deformylase from Burkholderia xenovorans
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Peptide deformylase | polymer | 185 | 20942.8 | 4 | UniProt (Q13XB1) Pfam (PF01327) In PDB | Burkholderia xenovorans (strain LB400) | PDF,Polypeptide deformylase |
2 | D, A, B, C | FE (II) ION | non-polymer | 55.8 | 4 | Chemie (FE2) | |||
3 | C, D, A, B | FORMIC ACID | non-polymer | 46.0 | 24 | Chemie (FMT) | |||
4 | D, B | 1,2-ETHANEDIOL | non-polymer | 62.1 | 3 | Chemie (EDO) | |||
5 | water | water | 18.0 | 681 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 177 (UniProt: Q13XB1)
PDB | External Database | Details |
---|---|---|
Met -7 | - | initiating methionine |
Ala -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
His -3 | - | expression tag |
His -2 | - | expression tag |
His -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 83771.2 | |
Non-Polymers* | Number of molecules | 31 |
Total formula weight | 1514.2 | |
All* | Total formula weight | 85285.4 |