5KD4
Crystal Structure of Murine MHC-I H-2Dd in complex with Murine Beta2-Microglobulin and a Variant of Peptide (PVI10) of HIV gp120 MN Isolate (IGPGRAFYVI)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (A, C) | H-2 class I histocompatibility antigen, D-D alpha chain | polymer | 277 | 32265.9 | 2 | UniProt (P01900) Pfam (PF00129) Pfam (PF07654) | Mus musculus (Mouse) | H-2D(D) |
| 2 | B, E (B, D) | Beta-2-microglobulin | polymer | 100 | 11791.5 | 2 | UniProt (P01887) Pfam (PF07654) | Mus musculus (Mouse) | |
| 3 | C, F (P, Q) | Peptide of HIV gp120 MN isolate, PVI10 (IGPGRAFYVI) | polymer | 10 | 1093.3 | 2 | UniProt (by SIFTS) (P05877) | Human immunodeficiency virus 1 |
Sequence modifications
A, C: 2 - 277 (UniProt: P01900)
B, D: 1 - 99 (UniProt: P01887)
| PDB | External Database | Details |
|---|---|---|
| Met 1 | - | initiating methionine |
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | initiating methionine |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 90301.5 | |
| All* | Total formula weight | 90301.5 |
