5KAR
Murine acid sphingomyelinase-like phosphodiesterase 3b (SMPDL3B)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Acid sphingomyelinase-like phosphodiesterase 3b | polymer | 427 | 48814.6 | 1 | UniProt (P58242) Pfam (PF00149) Pfam (PF19272) In PDB | Mus musculus (Mouse) | ASM-like phosphodiesterase 3b |
2 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
3 | C | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
4 | D | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 570.5 | 1 | In PDB GlyTouCan (G21290RB) | |||
5 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
6 | A | NITRATE ION | non-polymer | 62.0 | 2 | Chemie (NO3) | |||
7 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
8 | water | water | 18.0 | 496 | Chemie (HOH) |
Sequence modifications
A: 19 - 435 (UniProt: P58242)
PDB | External Database | Details |
---|---|---|
Asp 9 | - | expression tag |
Arg 10 | - | expression tag |
His 11 | - | expression tag |
His 12 | - | expression tag |
His 13 | - | expression tag |
His 14 | - | expression tag |
His 15 | - | expression tag |
His 16 | - | expression tag |
Lys 17 | - | expression tag |
Leu 18 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 48814.6 | |
Branched | Number of molecules | 3 |
Total formula weight | 1905.8 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 346.9 | |
All* | Total formula weight | 51067.3 |