5K3J

Crystals structure of Acyl-CoA oxidase-2 in Caenorhabditis elegans bound with FAD, ascaroside-CoA, and ATP

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B	Acyl-coenzyme A oxidase	polymer	674	76732.9	2	UniProt (O62137) Pfam (PF14749) Pfam (PF22924) Pfam (PF01756) In PDB	Caenorhabditis elegans
2	A, B	FLAVIN-ADENINE DINUCLEOTIDE	non-polymer		785.5	2	Chemie (FAD)
3	A, B	ADENOSINE-5'-TRIPHOSPHATE	non-polymer		507.2	2	Chemie (ATP)
4	A, B	~{S}-[2-[3-[[(2~{R})-4-[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,3-dimethyl-2-oxidanyl-butanoyl]amino]propanoylamino]ethyl] 5-[(2~{R},3~{R},5~{R},6~{S})-6-methyl-3,5-bis(oxidanyl)oxan-2-yl]oxypentanethioate	non-polymer		997.8	2	Chemie (6QA)
5	B	MAGNESIUM ION	non-polymer		24.3	2	Chemie (MG)
6		water	water		18.0	163	Chemie (HOH)

Sequence modifications

A, B: 1 - 661 (UniProt: O62137)

PDB	External Database	Details
Ala 432	Glu 432	conflict
Ala 662	-	expression tag
Ala 663	-	expression tag
Ala 664	-	expression tag
His 665	-	expression tag
His 666	-	expression tag
His 667	-	expression tag
His 668	-	expression tag
His 669	-	expression tag
His 670	-	expression tag
His 671	-	expression tag
His 672	-	expression tag
His 673	-	expression tag
His 674	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	2
	Total formula weight	153465.8
Non-Polymers*	Number of molecules	8
	Total formula weight	4629.7
All*	Total formula weight	158095.4

*Water molecules are not included.