5JYD
Crystal Structure of a Putative Short Chain Dehydrogenase from Burkholderia cenocepacia
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | Short chain dehydrogenase | polymer | 310 | 32615.8 | 8 | UniProt (B4EEE3) Pfam (PF13561) | Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) | |
| 2 | BA, BC, I, IB, KA... (C, H, A, F, D...) | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 8 | Chemie (NAD) | |||
| 3 | CA, CC, J, JB, LA... (C, H, A, F, D...) | MAGNESIUM ION | non-polymer | 24.3 | 8 | Chemie (MG) | |||
| 4 | AA, AB, BB, CB, DA... (B, E, C, H, A...) | IODIDE ION | non-polymer | 126.9 | 54 | Chemie (IOD) | |||
| 5 | AC, HB, JA, R (G, E, C, A) | SODIUM ION | non-polymer | 23.0 | 4 | Chemie (NA) | |||
| 6 | FB, GB, TA, UA, ZB (E, D, G) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 7 | JC, KC, LC, MC, NC... (A, B, C, D, E...) | water | water | 18.0 | 2209 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F, G, H: 14 - 314 (UniProt: B4EEE3)
| PDB | External Database | Details |
|---|---|---|
| Met 5 | - | initiating methionine |
| Ala 6 | - | expression tag |
| His 7 | - | expression tag |
| His 8 | - | expression tag |
| His 9 | - | expression tag |
| His 10 | - | expression tag |
| His 11 | - | expression tag |
| His 12 | - | expression tag |
| Met 13 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 260926.4 | |
| Non-Polymers* | Number of molecules | 79 |
| Total formula weight | 12757.0 | |
| All* | Total formula weight | 273683.3 |
