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5JWC

Structure of NDH2 from plasmodium falciparum in complex with RYL-552

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, H)
NADH dehydrogenase, putativepolymer52160299.22UniProt (Q8I302)
Pfam (PF07992)
Pfam (PF22365)
Pfam (PF22366)
Plasmodium falciparum (isolate 3D7)
2C, N
(A, H)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
3D, E, F, G, O...
(A, H)
MAGNESIUM IONnon-polymer24.38Chemie (MG)
4H, I, J, S, T...
(A, H)
FRAGMENT OF TRITON X-100non-polymer352.56Chemie (TRT)
5K, L, M, V
(A, H)
5-fluoro-3-methyl-2-{4-[4-(trifluoromethoxy)benzyl]phenyl}quinolin-4(1H)-onenon-polymer427.44Chemie (4W0)
6W, X
(A, H)
waterwater18.0448Chemie (HOH)
Sequence modifications
A, H: 25 - 533 (UniProt: Q8I302)
PDBExternal DatabaseDetails
Met 13-initiating methionine
Arg 14-expression tag
Gly 15-expression tag
Ser 16-expression tag
His 17-expression tag
His 18-expression tag
His 19-expression tag
His 20-expression tag
His 21-expression tag
His 22-expression tag
Gly 23-expression tag
Ser 24-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight120598.4
Non-Polymers*Number of molecules20
Total formula weight5590.2
All*Total formula weight126188.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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