5JT8
Structural basis for the limited antibody cross reactivity between the mite allergens Blo t 1 and Der p 1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Blo t 1 allergen | polymer | 333 | 38222.5 | 2 | UniProt (A1KXI0) Pfam (PF08246) Pfam (PF00112) | Blomia tropicalis (Mite) | |
| 2 | C (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 3 | D (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 4 | E, F, K, L (A, B) | CHLORIDE ION | non-polymer | 35.5 | 4 | Chemie (CL) | |||
| 5 | G, H, I, J, M... (A, B) | NITRATE ION | non-polymer | 62.0 | 6 | Chemie (NO3) | |||
| 6 | O, P (A, B) | water | water | 18.0 | 306 | Chemie (HOH) |
Sequence modifications
A, B: -17 - 315 (UniProt: A1KXI0)
| PDB | External Database | Details |
|---|---|---|
| Pro 157 | Ser 175 | conflict |
| Arg 185 | Glu 203 | conflict |
| Asp 197 | Asn 215 | conflict |
| His 216 | Gln 234 | conflict |
| Tyr 309 | Phe 327 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 76444.9 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 11 |
| Total formula weight | 735.0 | |
| All* | Total formula weight | 77604.4 |
