5JRK
Crystal Structure of the Sphingopyxin I Lasso Peptide Isopeptidase SpI-IsoP (SeMet-derived)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein | polymer | 756 | 83452.1 | 2 | UniProt (Q1GQ33) Pfam (PF00326) | Sphingopyxis alaskensis RB2256 | SpI-IsoP |
| 2 | C, D (A, B) | beta-D-glucopyranose | non-polymer | 180.2 | 2 | Chemie (BGC) |
Sequence modifications
A, B: 1 - 726 (UniProt: Q1GQ33)
| PDB | External Database | Details |
|---|---|---|
| Mse -19 | - | initiating methionine |
| Gly -18 | - | expression tag |
| Ser -17 | - | expression tag |
| Ser -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Leu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Pro -4 | - | expression tag |
| Arg -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Ser -1 | - | expression tag |
| His 0 | - | expression tag |
| Ser 727 | - | expression tag |
| Ala 728 | - | expression tag |
| Trp 729 | - | expression tag |
| Ser 730 | - | expression tag |
| His 731 | - | expression tag |
| Pro 732 | - | expression tag |
| Gln 733 | - | expression tag |
| Phe 734 | - | expression tag |
| Glu 735 | - | expression tag |
| Lys 736 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 166904.3 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 360.3 | |
| All* | Total formula weight | 167264.6 |






