5JP1
Structure of Xanthomonas campestris effector protein XopD bound to tomato SUMO
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Xanthomonas outer protein D | polymer | 220 | 24438.2 | 1 | UniProt (Q3BYJ5) Pfam (PF02902) | Xanthomonas campestris pv. vesicatoria (strain 85-10) | |
| 2 | B (B) | Small ubiquitin-related modifier | polymer | 96 | 10879.2 | 1 | UniProt (Q9SMD1) Pfam (PF11976) | Solanum lycopersicum (Tomato) | SUMO |
| 3 | C, E (A, B) | MALONATE ION | non-polymer | 102.0 | 2 | Chemie (MLI) | |||
| 4 | D (A) | (4S,5S)-1,2-DITHIANE-4,5-DIOL | non-polymer | 152.2 | 1 | Chemie (D1D) | |||
| 5 | F, G (A, B) | water | water | 18.0 | 199 | Chemie (HOH) |
Sequence modifications
A: 298 - 515 (UniProt: Q3BYJ5)
B: 1 - 95 (UniProt: Q9SMD1)
| PDB | External Database | Details |
|---|---|---|
| Gly 296 | - | expression tag |
| Pro 297 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Aye 96 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 35317.4 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 356.3 | |
| All* | Total formula weight | 35673.8 |
