5JMP
Structure of Plasmodium falciparum DXR in complex with a beta-substituted fosmidomycin analogue, LC57 and manganese
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplastic | polymer | 422 | 48164.5 | 2 | UniProt (Q8IKG4) Pfam (PF02670) Pfam (PF08436) Pfam (PF13288) | Plasmodium falciparum 3D7 | DXP reductoisomerase |
| 2 | C, N (A, B) | [(2R)-5-(3-fluorophenyl)-2-{2-[hydroxy(methyl)amino]-2-oxoethyl}pentyl]phosphonic acid | non-polymer | 333.3 | 2 | Chemie (LC7) | |||
| 3 | D, O (A, B) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 4 | E, P (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 5 | F, Q (A, B) | 4-ethylmorpholine | non-polymer | 115.2 | 2 | Chemie (6LB) | |||
| 6 | G, H, I, J, K... (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 15 | Chemie (EDO) | |||
| 7 | AA, Z (B, A) | water | water | 18.0 | 517 | Chemie (HOH) |
Sequence modifications
A, B: 75 - 488 (UniProt: Q8IKG4)
| PDB | External Database | Details |
|---|---|---|
| Met 67 | - | initiating methionine |
| Ala 68 | - | expression tag |
| His 69 | - | expression tag |
| His 70 | - | expression tag |
| His 71 | - | expression tag |
| His 72 | - | expression tag |
| His 73 | - | expression tag |
| His 74 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 96329.0 | |
| Non-Polymers* | Number of molecules | 23 |
| Total formula weight | 2122.0 | |
| All* | Total formula weight | 98451.0 |
