5JM1
Structure of tetrameric jacalin complexed with a trisaccharide, Gal alpha-(1,3) Gal beta-(1,4) Gal
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | Agglutinin alpha chain | polymer | 133 | 14673.5 | 4 | UniProt (P18670) Pfam (PF01419) | Artocarpus integer (Jack fruit) | Jacalin alpha chain |
| 2 | B, D, F, H (B, D, F, H) | Agglutinin beta-3 chain | polymer | 19 | 1944.2 | 4 | UniProt (P18673) | Artocarpus integer (Jack fruit) | Jacalin beta-3 chain |
| 3 | I (I) | alpha-D-galactopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-galactopyranose | branched | 504.4 | 1 | In PDB GlyTouCan (G31408VE) | |||
| 4 | J, K, L, M, O... (A, C, D, E, G) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 10 | Chemie (EDO) | |||
| 5 | N (C) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 6 | U (G) | methyl alpha-D-galactopyranoside | non-polymer | 194.2 | 1 | Chemie (AMG) | |||
| 7 | AA, BA, CA, V, W... (F, G, H, A, B...) | water | water | 18.0 | 403 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 66470.6 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 504.4 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 921.0 | |
| All* | Total formula weight | 67896.0 |
