5JK0
Crystal structure of XerH site-specific recombinase bound to difH substrate: pre-cleavage complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Tyrosine recombinase XerH | polymer | 363 | 42000.5 | 4 | UniProt (O25386) Pfam (PF18644) Pfam (PF00589) | Helicobacter pylori (strain ATCC 700392 / 26695) | |
| 2 | E, G (E, G) | DNA (30-MER) | polymer | 30 | 9196.0 | 2 | Helicobacter pylori 26695 | ||
| 3 | F, H (F, H) | DNA (30-MER) | polymer | 30 | 9269.0 | 2 | Helicobacter pylori 26695 | ||
| 4 | I, J, M, N, O (A, B) | GLYCEROL | non-polymer | 92.1 | 5 | Chemie (GOL) | |||
| 5 | K, P, R, S, T (A, B, C, D) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 6 | L (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 7 | Q (B) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 8 | AA, BA, U, V, W... (G, H, A, B, C...) | water | water | 18.0 | 1136 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 362 (UniProt: O25386)
| PDB | External Database | Details |
|---|---|---|
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 204932.1 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 912.4 | |
| All* | Total formula weight | 205844.5 |
