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5JJY

Crystal structure of SETD2 bound to histone H3.3 K36M peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Histone-lysine N-methyltransferase SETD2polymer27932042.61UniProt (Q9BYW2)
Pfam (PF17907)
Pfam (PF00856)
Homo sapiens (Human)HIF-1,Huntingtin yeast partner B,Huntingtin-interacting protein 1,HIP-1,Huntingtin-interacting protein B,Lysine N-methyltransferase 3A,SET domain-containing protein 2,hSET2,p231HBP
2B
(B)
Histone H3.3polymer141560.81UniProt (P84243)Homo sapiens
3C, D, E
(A)
ZINC IONnon-polymer65.43Chemie (ZN)
4F
(A)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.41Chemie (SAH)
5G, H, I, J, K
(A, B)
THIOCYANATE IONnon-polymer58.15Chemie (SCN)
6L, M
(A, B)
waterwater18.0204Chemie (HOH)
Sequence modifications
A: 1434 - 1711 (UniProt: Q9BYW2)
PDBExternal DatabaseDetails
Ser 1433-expression tag
B: 29 - 42 (UniProt: P84243)
PDBExternal DatabaseDetails
Met 36Lys 37engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight33603.4
Non-Polymers*Number of molecules9
Total formula weight871.0
All*Total formula weight34474.4
*Water molecules are not included.

246905

PDB entries from 2025-12-31

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