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5JJY

Crystal structure of SETD2 bound to histone H3.3 K36M peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0005634cellular_componentnucleus
A0016279molecular_functionprotein-lysine N-methyltransferase activity
A0042054molecular_functionhistone methyltransferase activity
A0046975molecular_functionhistone H3K36 methyltransferase activity
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 1801
ChainResidue
ACYS1499
ACYS1501
ACYS1516
ACYS1520

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1802
ChainResidue
ACYS1516
ACYS1529
ACYS1533
ACYS1539

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 1803
ChainResidue
ACYS1678
ACYS1680
ACYS1685
ACYS1631

site_idAC4
Number of Residues17
Detailsbinding site for residue SAH A 1804
ChainResidue
ALYS1560
AGLY1561
ATRP1562
AHIS1603
ATYR1604
ATYR1605
AARG1625
APHE1626
AASN1628
AHIS1629
ATYR1666
ALYS1677
ACYS1678
APHE1679
AHOH1948
AHOH2000
AHOH2036

site_idAC5
Number of Residues7
Detailsbinding site for residue SCN A 1805
ChainResidue
AMET1497
AGLN1498
ACYS1499
AASN1522
ACYS1529
ASER1530
ACYS1533

site_idAC6
Number of Residues6
Detailsbinding site for residue SCN A 1806
ChainResidue
AHIS1629
APHE1668
AARG1686
AGLY1690
AGLY1691
AHOH1981

site_idAC7
Number of Residues1
Detailsbinding site for residue SCN A 1807
ChainResidue
ACYS1463

site_idAC8
Number of Residues5
Detailsbinding site for residue SCN A 1808
ChainResidue
ACYS1539
ASER1540
AGLN1548
AHOH1972
AHOH1996

site_idAC9
Number of Residues6
Detailsbinding site for residue SCN B 101
ChainResidue
ATHR1637
ALYS1639
BPRO38
BHIS39
BARG40
BHOH208

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsSITE: Interaction with ZMYND11 => ECO:0000269|PubMed:24590075
ChainResidueDetails
ACYS1520
ACYS1529
ACYS1533
ACYS1539
ACYS1631
ACYS1678
ACYS1680
ACYS1685
ACYS1516
BSER31
ACYS1501

site_idSWS_FT_FI2
Number of Residues1
DetailsMOD_RES: Phosphoserine => ECO:0000269|PubMed:15851689, ECO:0000269|PubMed:16185088
ChainResidueDetails
APHE1679
AHIS1603
AASN1628
AGLN1676
BSER31

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6-methyllysine; alternate => ECO:0000269|PubMed:16185088, ECO:0000269|PubMed:16267050, ECO:0000269|PubMed:17194708, ECO:0000269|PubMed:7309716
ChainResidueDetails
BMET36

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6-methyllysine => ECO:0000250|UniProtKB:P68431
ChainResidueDetails
BLYS37

site_idSWS_FT_FI5
Number of Residues1
DetailsMOD_RES: Phosphotyrosine => ECO:0000269|PubMed:19783980
ChainResidueDetails
BTYR41

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PDB entries from 2024-06-12

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