5JIF
Crystal structure of mouse hepatitis virus strain DVIM Hemagglutinin-Esterase
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Hemagglutinin-esterase | polymer | 381 | 43017.0 | 2 | UniProt (O92367) Pfam (PF03996) Pfam (PF02710) In PDB | Murine coronavirus (MHV-DVIM) | HE protein,E3 glycoprotein |
2 | C, D, E, H, I... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 8 | In PDB GlyTouCan (G42666HT) | |||
3 | F | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1397.2 | 1 | In PDB GlyTouCan (G61846BY) | |||
4 | G | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
5 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
6 | A | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
7 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 5 | Chemie (NAG) | |||
8 | water | water | 18.0 | 223 | Chemie (HOH) |
Sequence modifications
A, B: 24 - 395 (UniProt: O92367)
PDB | External Database | Details |
---|---|---|
Leu 22 | - | expression tag |
Ala 23 | - | expression tag |
Ser 396 | - | expression tag |
Asp 397 | - | expression tag |
Pro 398 | - | expression tag |
Leu 399 | - | expression tag |
Val 400 | - | expression tag |
Pro 401 | - | expression tag |
Arg 402 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 86034.0 | |
Branched | Number of molecules | 10 |
Total formula weight | 5703.3 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 1336.2 | |
All* | Total formula weight | 93073.5 |