5JDS
Crystal structure of PD-L1 complexed with a nanobody at 1.7 Angstron resolution
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (B) | Nanobody | polymer | 146 | 15774.5 | 1 | Camelidae | ||
| 2 | B (A) | Programmed cell death 1 ligand 1 | polymer | 124 | 14336.4 | 1 | UniProt (Q9NZQ7) Pfam (PF07686) | Homo sapiens (Human) | Programmed death ligand 1,B7 homolog 1,B7-H1 |
| 3 | C, H (B, A) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | D, E, F (B) | CHLORIDE ION | non-polymer | 35.5 | 3 | Chemie (CL) | |||
| 5 | G (A) | SULFATE ION | non-polymer | 96.1 | 1 | Chemie (SO4) | |||
| 6 | I, J (B, A) | water | water | 18.0 | 159 | Chemie (HOH) |
Sequence modifications
A: 18 - 132 (UniProt: Q9NZQ7)
| PDB | External Database | Details |
|---|---|---|
| Met 17 | - | expression tag |
| Leu 133 | - | expression tag |
| Glu 134 | - | expression tag |
| His 135 | - | expression tag |
| His 136 | - | expression tag |
| His 137 | - | expression tag |
| His 138 | - | expression tag |
| His 139 | - | expression tag |
| His 140 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 30111.0 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 248.4 | |
| All* | Total formula weight | 30359.4 |
