5JB2
Crystal structure of chicken LGP2 with 5'ppp 10-mer dsRNA and ADP-AlF4-Mg2+ at 2.2 A resolution.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | LGP2 | polymer | 680 | 77459.0 | 1 | UniProt (G0YYQ5) Pfam (PF04851) Pfam (PF18119) Pfam (PF00271) Pfam (PF11648) | Gallus gallus (Chicken) | |
| 2 | B (X) | RNA (5'-R(*GPPP*GP*UP*AP*CP*GP*UP*AP*CP*CP*C)-3') | polymer | 11 | 3642.1 | 1 | synthetic construct | ||
| 3 | C (Y) | RNA (5'-R(*GPPP*GP*UP*AP*CP*GP*UP*AP*CP*C)-3') | polymer | 10 | 3336.9 | 1 | synthetic construct | ||
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 5 | E (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 6 | F (A) | TETRAFLUOROALUMINATE ION | non-polymer | 103.0 | 1 | Chemie (ALF) | |||
| 7 | G, H (A, X) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 8 | I, J, K (A, X, Y) | water | water | 18.0 | 344 | Chemie (HOH) |
Sequence modifications
A: 2 - 674 (UniProt: G0YYQ5)
| PDB | External Database | Details |
|---|---|---|
| Gly -5 | - | expression tag |
| Ala -4 | - | expression tag |
| Met -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Gly 0 | - | expression tag |
| Ser 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 84438.0 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 644.2 | |
| All* | Total formula weight | 85082.2 |
