5J50
Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E, G (A, C, E, G) | Agglutinin alpha chain | polymer | 133 | 14673.5 | 4 | UniProt (P18670) Pfam (PF01419) | Artocarpus integer (Jack fruit) | Jacalin alpha chain |
| 2 | B, D, F, H (B, D, F, H) | Agglutinin beta-3 chain | polymer | 19 | 1944.2 | 4 | UniProt (P18673) | Artocarpus integer (Jack fruit) | Jacalin beta-3 chain |
| 3 | I, J, K, L (I, J, K, L) | beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-alpha-D-galactopyranose | branched | 383.3 | 4 | In PDB BIRD (PRD_900084) GlyTouCan (G00031MO) | Thomsen-Friedenreich antigen | ||
| 4 | AA, CA, M, N, O... (G, H, A, C, E...) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 12 | Chemie (EDO) | |||
| 5 | BA, P, Q, Y (G, A, C, E) | P-NITROPHENOL | non-polymer | 139.1 | 4 | Chemie (NPO) | |||
| 6 | V (E) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 7 | DA, EA, FA, GA, HA... (A, B, C, D, E...) | water | water | 18.0 | 427 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 66470.6 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1533.4 | |
| Non-Polymers* | Number of molecules | 17 |
| Total formula weight | 1407.4 | |
| All* | Total formula weight | 69411.4 |
