5J50
Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | BRUKER AXS MICROSTAR |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2015-08-12 |
| Detector | MAR scanner 345 mm plate |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 58.530, 81.650, 66.890 |
| Unit cell angles | 90.00, 100.00, 90.00 |
Refinement procedure
| Resolution | 51.270 - 2.050 |
| R-factor | 0.187 |
| Rwork | 0.182 |
| R-free | 0.23300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1ku8 |
| RMSD bond length | 0.019 |
| RMSD bond angle | 2.021 |
| Data reduction software | iMOSFLM (1.0.5) |
| Data scaling software | SCALA |
| Phasing software | PHASER (2.3) |
| Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 51.270 | 2.150 |
| High resolution limit [Å] | 2.040 | 2.040 |
| Rmerge | 0.309 | |
| Number of reflections | 39076 | |
| <I/σ(I)> | 4.3 | |
| Completeness [%] | 91.3 | |
| Redundancy | 4.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 298 | 15% poly(ethylene glycol) 8000, 10% (v/v) isopropanol, 100mM HEPES (pH 7.4) |






