5J50
Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-08-12 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 58.530, 81.650, 66.890 |
Unit cell angles | 90.00, 100.00, 90.00 |
Refinement procedure
Resolution | 51.270 - 2.050 |
R-factor | 0.187 |
Rwork | 0.182 |
R-free | 0.23300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ku8 |
RMSD bond length | 0.019 |
RMSD bond angle | 2.021 |
Data reduction software | iMOSFLM (1.0.5) |
Data scaling software | SCALA |
Phasing software | PHASER (2.3) |
Refinement software | REFMAC (5.6.0117) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 51.270 | 2.150 |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.309 | |
Number of reflections | 39076 | |
<I/σ(I)> | 4.3 | |
Completeness [%] | 91.3 | |
Redundancy | 4.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 298 | 15% poly(ethylene glycol) 8000, 10% (v/v) isopropanol, 100mM HEPES (pH 7.4) |