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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

5J4Z

Architecture of tight respirasome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)		COMPLEX I ND3polymer1028698.71Ovis aries (SHEEP)
2B
(B)		COMPLEX I PSST/NDUFS7polymer15413196.31Ovis aries (SHEEP)
3C
(C)		COMPLEX I 30KDA/NDUFS3polymer19416528.31Ovis aries (SHEEP)
4D
(D)		COMPLEX I 49KDA/NDUFS2polymer38432698.21Ovis aries (SHEEP)
5E
(E)		COMPLEX I 24KDA/NDUFV2polymer18916175.01Ovis aries (SHEEP)
6F
(F)		COMPLEX I 51KDA/NDUFV1polymer42936600.11Ovis aries (SHEEP)
7G
(G)		COMPLEX I 75KDA/NDUFS1polymer65255758.01Ovis aries (SHEEP)
8H
(H)		COMPLEX I ND1polymer29725294.01Ovis aries (SHEEP)
9I
(I)		COMPLEX I TYKY/NDUFS8polymer17114715.21Ovis aries (SHEEP)
10J
(J)		COMPLEX I ND6polymer17114570.91Ovis aries (SHEEP)
11K
(K)		COMPLEX I ND4Lpolymer937932.81Ovis aries (SHEEP)
12L
(L)		COMPLEX I ND5polymer57548953.41Ovis aries (SHEEP)
13M
(M)		COMPLEX I ND4polymer45538740.71Ovis aries (SHEEP)
14N
(N)		COMPLEX I ND2polymer34529379.11Ovis aries (SHEEP)
15O
(O)		COMPLEX I 18KDA/NDUFS6polymer1048868.91Ovis aries (SHEEP)
16P
(P)		COMPLEX I 13KDA/NDUFS6polymer857251.91Ovis aries (SHEEP)
17Q
(Q)		COMPLEX I 15KDA/NDUFS5polymer665634.91Ovis aries (SHEEP)
18R
(R)		COMPLEX I MWFE/NDUFA1polymer292486.11Ovis aries (SHEEP)
19DA, S
(S, d)		COMPLEX I B8/NDUFA2polymer806826.42Ovis aries (SHEEP)
20T
(T)		COMPLEX I B9/NDUFA3polymer534528.61Ovis aries (SHEEP)
21U
(U)		COMPLEX I B13/NDUFA5polymer968188.11Ovis aries (SHEEP)
22V
(V)		COMPLEX I B14/NDUFA6polymer1129549.81Ovis aries (SHEEP)
23W
(W)		COMPLEX I PGIV/NDUFA8polymer1038783.81Ovis aries (SHEEP)
24X
(X)		COMPLEX I 39KDA/NDUFA9polymer30926315.31Ovis aries (SHEEP)
25Y
(Y)		COMPLEX I 42KDA/NDUFA10polymer32227421.61Ovis aries (SHEEP)
26Z
(Z)		COMPLEX I B14.7/NDUFA11polymer11910145.51Ovis aries (SHEEP)
27AA
(a)		COMPLEX I B17.2/NDUFA12polymer1119464.71Ovis aries (SHEEP)
28BA
(b)		COMPLEX I B16.6/NDUFA13polymer927847.71Ovis aries (SHEEP)
29CA
(c)		COMPLEX I SDAP/NDUFAB1polymer796741.31Ovis aries (SHEEP)
30EA
(e)		COMPLEX I SDAP/NDUFAB1polymer554698.81Ovis aries (SHEEP)
31FA
(f)		COMPLEX I SDAP/NDUFAB1polymer595039.21Ovis aries (SHEEP)
32GA
(g)		COMPLEX I B15/NDUFB4polymer13011081.71Ovis aries (SHEEP)
33HA, UA, VA
(h, 9, z)		COMPLEX I B18/NDUFB7polymer635379.63Ovis aries (SHEEP)
34IA
(i)		COMPLEX I B22/NDUFB9polymer705975.41Ovis aries (SHEEP)
35JA
(j)		COMPLEX I PDSW/NDUFB10polymer443762.61Ovis aries (SHEEP)
36KA
(k)		COMPLEX I ESSS/NDUFB11polymer837081.71Ovis aries (SHEEP)
37LA
(0)		COMPLEX I KFYI/NDUFC1polymer363081.81Ovis aries (SHEEP)
38MA
(1)		COMPLEX I B14.5B/NDUFC2polymer302571.21Ovis aries (SHEEP)
39NA
(2)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 1polymer383252.01Ovis aries (SHEEP)
40OA, PA
(3, 4)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 2polymer282401.02Ovis aries (SHEEP)
41QA
(5)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 3polymer342911.61Ovis aries (SHEEP)
42RA
(6)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 4polymer211805.21Ovis aries (SHEEP)
43SA
(7)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 5polymer393337.11Ovis aries (SHEEP)
44TA
(8)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 6polymer272315.81Ovis aries (SHEEP)
45WA
(y)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 11polymer463932.81Ovis aries (SHEEP)
46XA
(x)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 12polymer131124.41Ovis aries (SHEEP)
47YA
(w)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 13polymer242060.51Ovis aries (SHEEP)
48ZA
(v)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 14polymer181549.91Ovis aries (SHEEP)
49AB
(u)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 15polymer161379.71Ovis aries (SHEEP)
50BB
(t)		COMPLEX I UNKNOWN SUBUNIT FRAGMENT 16polymer121039.31Ovis aries (SHEEP)
51CB, NB
(AA, AL)		COMPLEX III SUBUNIT 1 / CORE 1polymer44949652.72UniProt (W5Q5G6)
Pfam (PF00675)
Pfam (PF05193)		Ovis aries (Sheep)
52DB, OB
(AB, AM)		COMPLEX III SUBUNIT 2 / CORE 2polymer42345189.82UniProt (W5Q0F9)Ovis aries (Sheep)
53EB, PB
(AC, AN)		Cytochrome bpolymer37842684.62UniProt (P24959)
Pfam (PF00033)
Pfam (PF00032)		Ovis aries (Sheep)Complex III subunit 3,Complex III subunit III,Cytochrome b-c1 complex subunit 3,Ubiquinol-cytochrome-c reductase complex cytochrome b subunit
54FB, QB
(AD, AO)		COMPLEX III SUBUNIT 4 / CYTOCHROME C1polymer24127323.32UniProt (W5Q0A9)Ovis aries (Sheep)
55GB, RB
(AE, AP)		Cytochrome b-c1 complex subunit Rieske, mitochondrialpolymer19621654.62UniProt (W5P2X9)Ovis aries (Sheep)COMPLEX III SUBUNIT 5 / RIESKE ISP
56HB, SB
(AF, AQ)		COMPLEX III SUBUNIT 7 / 14KDApolymer10512949.82UniProt (W5P642)
Pfam (PF02271)		Ovis aries (Sheep)
57IB, TB
(AG, AR)		COMPLEX III SUBUNIT 8 / QP-Cpolymer758884.32UniProt (W5PUP9)
Pfam (PF02939)		Ovis aries (Sheep)
58JB, UB
(AH, AS)		Cytochrome b-c1 complex subunit 6polymer677920.92UniProt (B9VH04)Ovis aries (Sheep)Complex III subunit 6,Mitochondrial hinge protein
59KB, VB
(AI, AT)		Cytochrome b-c1 complex subunit Rieske, mitochondrialpolymer575824.82UniProt (W5P2X9)Ovis aries (Sheep)COMPLEX III SUBUNIT 11 / 8KDA
60LB, WB
(AJ, AU)		COMPLEX III SUBUNIT 9 / 7.2KDApolymer606938.02UniProt (W5P6B2)Ovis aries (Sheep)
61MB, XB
(AK, AV)		COMPLEX III SUBUNIT 10 / 6.4KDApolymer515932.92UniProt (W5PSD1)Ovis aries (Sheep)
62YB
(BN)		Cytochrome c oxidase subunit 1polymer51457075.91UniProt (O78749)
Pfam (PF00115)		Ovis aries (Sheep)Cytochrome c oxidase polypeptide I, COMPLEX IV COX1
63ZB
(BO)		Cytochrome c oxidase subunit 2polymer22726015.41UniProt (O78750)
Pfam (PF02790)
Pfam (PF00116)		Ovis aries (Sheep)Cytochrome c oxidase polypeptide II, COMPLEX IV COX2
64AC
(BC)		Cytochrome c oxidase subunit 3polymer25929655.21UniProt (O21619)
Pfam (PF00510)		Ovis aries (Sheep)Cytochrome c oxidase polypeptide III, COMPLEX IV COX3
65BC
(BD)		COMPLEX IV COX4polymer14416899.31UniProt (W5PPE8)
Pfam (PF02936)		Ovis aries (Sheep)
66CC
(BE)		COMPLEX IV COX5Apolymer10512083.71UniProt (W5NXT8)
Pfam (PF02284)		Ovis aries (Sheep)
67DC
(BP)		COMPLEX IV COX5Bpolymer9810670.01UniProt (W5PW27)
Pfam (PF01215)		Ovis aries (Sheep)
68EC
(BG)		Cytochrome c oxidase subunit 6A, mitochondrialpolymer849538.81UniProt (W5PI52)Ovis aries (Sheep)Cytochrome c oxidase polypeptide VIa, COMPLEX IV COX6A2
69FC
(BH)		COMPLEX IV COX6B1polymer799411.61UniProt (W5P4E7)Ovis aries (Sheep)
70GC
(BI)		COMPLEX IV COX6Cpolymer738467.01UniProt (W5PXG3)
Pfam (PF02937)		Ovis aries (Sheep)
71HC
(BJ)		Cytochrome c oxidase subunit 7A1, mitochondrialpolymer586535.51UniProt (W5P5H0)
Pfam (PF02238)		Ovis aries (Sheep)COMPLEX IV COX7A2
72IC
(BK)		COMPLEX IV COX7Bpolymer495461.11UniProt (W5QE72)
Pfam (PF05392)		Ovis aries (Sheep)
73JC
(BL)		COMPLEX IV COX7Cpolymer465362.31UniProt (W5Q6E1)
Pfam (PF02935)
UniProt (by SIFTS) (A0A6P7E5B2)		Ovis aries (Sheep)
74KC
(BM)		COMPLEX IV COX8Bpolymer434738.51UniProt (W5PFK9)
Pfam (PF02285)		Ovis aries (Sheep)
75LC, NC, OC, PC, RC...
(B, F, G, I)		IRON/SULFUR CLUSTERnon-polymer351.66Chemie (SF4)
76AD, MC, QC, WC
(AP, E, G, AE)		FE2/S2 (INORGANIC) CLUSTERnon-polymer175.84Chemie (FES)
77TC, UC, VC, XC, YC...
(AC, AD, AN, AO)		PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.56Chemie (HEM)
78BD
(BN)		COPPER (II) IONnon-polymer63.51Chemie (CU)
79CD, DD
(BN)		HEME-Anon-polymer852.82Chemie (HEA)
80ED
(BO)		DINUCLEAR COPPER IONnon-polymer127.11Chemie (CUA)
Sequence modifications
AA, AL: 1 - 446 (UniProt: W5Q5G6)
PDBExternal DatabaseDetails
Ile 241Leu 275conflict
Arg 242Cys 276conflict
Arg 244Pro 278conflict
Glu 245Trp 279conflict
Asp 246Gly 280conflict
Pro 249Gln 286conflict
Ala 251Trp 288conflict
Ala 254Pro 291conflict
Ile 255Phe 292conflict
Ala 256Gln 293conflict
Val 257Ile 294conflict
Glu 258Arg 295conflict
Gly 259His 296conflict
AC, AN: 2 - 379 (UniProt: P24959)
PDBExternal DatabaseDetails
Ser 185Phe 185conflict
Ile 295Val 295conflict
Leu 303Ile 303conflict
Ile 359Phe 359conflict
Leu 361Ile 361conflict
Met 363Leu 363conflict
AD, AO: 1 - 241 (UniProt: W5Q0A9)
PDBExternal DatabaseDetails
Thr 139-insertion
Gly 140Arg 223conflict
AF, AQ: 6 - 110 (UniProt: W5P642)
PDBExternal DatabaseDetails
Asp 56Asn 55conflict
Ala 108Thr 107conflict
AK, AV: 1 - 51 (UniProt: W5PSD1)
PDBExternal DatabaseDetails
Gln 22Ser 22conflict
BD: 4 - 147 (UniProt: W5PPE8)
PDBExternal DatabaseDetails
Ile 97Leu 119conflict
Glu 99Gly 121conflict
Lys 100Trp 122conflict
His 101Thr 123conflict
Tyr 102Ala 124conflict
BI: 1 - 73 (UniProt: W5PXG3)
PDBExternal DatabaseDetails
Met 26Val 27conflict
Phe 31Ser 32conflict
Lys 36Asn 37conflict
BJ: 1 - 58 (UniProt: W5P5H0)
PDBExternal DatabaseDetails
Phe 1Leu 20conflict
Leu 36Met 55conflict
BK: 6 - 54 (UniProt: W5QE72)
PDBExternal DatabaseDetails
Phe 9Cys 38conflict
Ile 30Val 59conflict
Arg 47Thr 76conflict
BM: 1 - 43 (UniProt: W5PFK9)
PDBExternal DatabaseDetails
-Thr 38deletion
-Gln 39deletion
Gly 18Ala 44conflict
Val 21Ala 47conflict
Asn 39His 65conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains89
Total formula weight1276889.0
Non-Polymers*Number of molecules20
Total formula weight8408.4
All*Total formula weight1285297.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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