5IQR

Structure of RelA bound to the 70S ribosome

This is a non-PDB format compatible entry.

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (B)	50S ribosomal protein L2	polymer	273	29923.6	1	UniProt (P60422) Pfam (PF00181) Pfam (PF03947)	Escherichia coli K-12
2	B (C)	50S ribosomal protein L3	polymer	209	22277.5	1	UniProt (P60438) Pfam (PF00297)	Escherichia coli K-12
3	C (D)	50S ribosomal protein L4	polymer	201	22121.6	1	UniProt (P60723) Pfam (PF00573)	Escherichia coli K-12
4	D (E)	50S ribosomal protein L5	polymer	179	20333.6	1	UniProt (P62399) Pfam (PF00281) Pfam (PF00673)	Escherichia coli K-12
5	E (F)	50S ribosomal protein L6	polymer	177	18932.8	1	UniProt (P0AG55) Pfam (PF00347)	Escherichia coli K-12
6	F (G)	50S ribosomal protein L9	polymer	149	15789.0	1	UniProt (P0A7R1) Pfam (PF01281) Pfam (PF03948)	Escherichia coli K-12
7	G (H)	50S ribosomal protein L10	polymer	165	17736.6	1	UniProt (P0A7J3) Pfam (PF00466)	Escherichia coli K-12	50S ribosomal protein L8
8	H (I)	50S ribosomal protein L11	polymer	142	14894.4	1	UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298)	Escherichia coli K-12
9	I (J)	50S ribosomal protein L13	polymer	142	16050.6	1	UniProt (P0AA10) Pfam (PF00572)	Escherichia coli K-12
10	J (K)	50S ribosomal protein L14	polymer	123	13565.1	1	UniProt (P0ADY3) Pfam (PF00238)	Escherichia coli K-12
11	K (L)	50S ribosomal protein L15	polymer	144	15008.5	1	UniProt (P02413) Pfam (PF00828)	Escherichia coli K-12
12	L (M)	50S ribosomal protein L16	polymer	136	15312.3	1	UniProt (P0ADY7) Pfam (PF00252)	Escherichia coli K-12
13	M (N)	50S ribosomal protein L17	polymer	127	14393.7	1	UniProt (P0AG44) Pfam (PF01196)	Escherichia coli K-12
14	N (O)	50S ribosomal protein L18	polymer	117	12794.7	1	UniProt (P0C018) Pfam (PF00861)	Escherichia coli K-12
15	O (P)	50S ribosomal protein L19	polymer	115	13159.3	1	UniProt (P0A7K6) Pfam (PF01245)	Escherichia coli K-12
16	P (Q)	50S ribosomal protein L20	polymer	118	13528.0	1	UniProt (P0A7L3) Pfam (PF00453)	Escherichia coli K-12
17	Q (R)	50S ribosomal protein L21	polymer	103	11586.4	1	UniProt (P0AG48) Pfam (PF00829)	Escherichia coli K-12
18	R (S)	50S ribosomal protein L22	polymer	110	12253.4	1	UniProt (P61175) Pfam (PF00237)	Escherichia coli K-12
19	S (T)	50S ribosomal protein L23	polymer	100	11222.2	1	UniProt (P0ADZ0) Pfam (PF00276)	Escherichia coli K-12
20	T (U)	50S ribosomal protein L24	polymer	104	11339.3	1	UniProt (P60624) Pfam (PF00467) Pfam (PF17136)	Escherichia coli K-12
21	U (V)	50S ribosomal protein L25	polymer	94	10713.5	1	UniProt (P68919) Pfam (PF01386)	Escherichia coli K-12
22	V (W)	50S ribosomal protein L27	polymer	85	9146.5	1	UniProt (P0A7L8) Pfam (PF01016)	Escherichia coli K-12
23	W (X)	50S ribosomal protein L28	polymer	78	9027.6	1	UniProt (P0A7M2) Pfam (PF00830)	Escherichia coli K-12
24	X (Y)	50S ribosomal protein L29	polymer	63	7286.5	1	UniProt (P0A7M6) Pfam (PF00831)	Escherichia coli K-12
25	Y (Z)	50S ribosomal protein L30	polymer	59	6554.8	1	UniProt (P0AG51) Pfam (PF00327)	Escherichia coli K-12
26	Z (a)	50S ribosomal protein L31	polymer	70	7887.1	1	UniProt (P0A7M9) Pfam (PF01197)	Escherichia coli K-12
27	AA (b)	50S ribosomal protein L32	polymer	57	6463.4	1	UniProt (P0A7N4) Pfam (PF01783)	Escherichia coli K-12
28	BA (c)	50S ribosomal protein L33	polymer	55	6388.6	1	UniProt (P0A7N9) Pfam (PF00471)	Escherichia coli K-12
29	CA (d)	50S ribosomal protein L34	polymer	46	5397.5	1	UniProt (P0A7P5) Pfam (PF00468)	Escherichia coli K-12
30	DA (e)	50S ribosomal protein L35	polymer	65	7313.0	1	UniProt (P0A7Q1) Pfam (PF01632)	Escherichia coli K-12	Ribosomal protein A
31	EA (f)	50S ribosomal protein L36	polymer	38	4377.4	1	UniProt (P0A7Q6) Pfam (PF00444)	Escherichia coli K-12	Ribosomal protein B
32	FA (g)	30S ribosomal protein S2	polymer	241	26781.7	1	UniProt (P0A7V0) Pfam (PF00318)	Escherichia coli K-12
33	GA (h)	30S ribosomal protein S3	polymer	233	25975.2	1	UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189)	Escherichia coli K-12
34	HA (i)	30S ribosomal protein S4	polymer	206	23514.2	1	UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479)	Escherichia coli K-12
35	IA (j)	30S ribosomal protein S5	polymer	167	17629.4	1	UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719)	Escherichia coli K-12
36	JA (k)	30S ribosomal protein S6	polymer	135	15727.5	1	UniProt (P02358) Pfam (PF01250)	Escherichia coli K-12
37	KA (l)	30S ribosomal protein S7	polymer	179	20055.2	1	UniProt (P02359) Pfam (PF00177)	Escherichia coli K-12
38	LA (m)	30S ribosomal protein S8	polymer	130	14146.6	1	UniProt (P0A7W7) Pfam (PF00410)	Escherichia coli K-12
39	MA (n)	30S ribosomal protein S9	polymer	130	14886.3	1	UniProt (P0A7X3) Pfam (PF00380)	Escherichia coli K-12
40	NA (o)	30S ribosomal protein S10	polymer	103	11755.6	1	UniProt (P0A7R5) Pfam (PF00338)	Escherichia coli K-12
41	OA (p)	30S ribosomal protein S11	polymer	129	13871.0	1	UniProt (P0A7R9) Pfam (PF00411)	Escherichia coli K-12
42	PA (q)	30S ribosomal protein S12	polymer	124	13814.2	1	UniProt (P0A7S3) Pfam (PF00164)	Escherichia coli K-12
43	QA (r)	30S ribosomal protein S13	polymer	118	13128.5	1	UniProt (P0A7S9) Pfam (PF00416)	Escherichia coli K-12
44	RA (s)	30S ribosomal protein S14	polymer	101	11606.6	1	UniProt (P0AG59) Pfam (PF00253)	Escherichia coli K-12
45	SA (t)	30S ribosomal protein S15	polymer	89	10290.8	1	UniProt (P0ADZ4) Pfam (PF00312)	Escherichia coli K-12
46	TA (u)	30S ribosomal protein S16	polymer	82	9207.6	1	UniProt (P0A7T3) Pfam (PF00886)	Escherichia coli K-12
47	UA (v)	30S ribosomal protein S17	polymer	84	9724.5	1	UniProt (P0AG63) Pfam (PF00366)	Escherichia coli K-12
48	VA (w)	30S ribosomal protein S18	polymer	75	9063.5	1	UniProt (P0A7T7) Pfam (PF01084)	Escherichia coli K-12
49	WA (x)	30S ribosomal protein S19	polymer	92	10455.4	1	UniProt (P0A7U3) Pfam (PF00203)	Escherichia coli K-12
50	XA (y)	30S ribosomal protein S20	polymer	87	9708.5	1	UniProt (P0A7U7) Pfam (PF01649)	Escherichia coli K-12
51	YA (z)	30S ribosomal protein S21	polymer	71	8524.0	1	UniProt (P68679) Pfam (PF01165)	Escherichia coli K-12
52	ZA (1)	LSU rRNA	polymer	2904	941832.6	1		Escherichia coli K-12
53	AB (2)	SSU rRNA	polymer	1533	497075.8	1		Escherichia coli K-12
54	BB (3)	5S rRNA	polymer	118	38177.8	1		Escherichia coli K-12
55	CB (4)	E-site tRNA(Phe)	polymer	76	24485.5	1		Escherichia coli K-12
56	DB (5)	P-site fMet-tRNA(fMet)	polymer	78	24893.0	1		Escherichia coli K-12
57	EB (6)	A/T tRNA(Phe)	polymer	76	24707.9	1		Escherichia coli K-12
58	FB (7)	mRNA	polymer	10	3146.9	1		synthetic construct
59	GB (8)	GTP pyrophosphokinase	polymer	744	83996.6	1	UniProt (P0AG20) Pfam (PF13328) Pfam (PF04607) Pfam (PF02824) Pfam (PF19296) Pfam (PF13291)	Escherichia coli K-12	(p)ppGpp synthase,ATP:GTP 3'-pyrophosphotransferase,ppGpp synthase I
60	AC, AD, AE, AF, AG... (1, 2, B, C, L...)	MAGNESIUM ION	non-polymer		24.3	299	Chemie (MG)
61	NB, OB, YM (a, f, 8)	ZINC ION	non-polymer		65.4	3	Chemie (ZN)
62	PM (2)	PAROMOMYCIN	non-polymer		615.6	1	Chemie (PAR)
63	WM (5)	METHIONINE	non-polymer		149.2	1	Chemie (MET)
64	ZM (B)	water	water		18.0	2	Chemie (HOH)

Sequence modifications

h: 1 - 233 (UniProt: P0A7V3)

PDB	External Database	Details
Leu 207	Ile 207	conflict
Gly 208	Leu 208	conflict

w: 1 - 75 (UniProt: P0A7T7)

PDB	External Database	Details
Glu 15	Ala 15	conflict

Contents of the asymmetric unit

Polymers	Number of chains	59
	Total formula weight	2330960.5
Non-Polymers*	Number of molecules	304
	Total formula weight	8228.3
All*	Total formula weight	2339188.7

*Water molecules are not included.