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5IIT

Structure of SPX domain of the yeast inorganic polyphophate polymerase Vtc4 crystallized by carrier-driven crystallization in fusion with the macro domain of human histone macroH2A1.1

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Vacuolar transporter chaperone 4,Core histone macro-H2A.1polymer37442234.94UniProt (P47075)
UniProt (O75367)
Pfam (PF01661)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)Phosphate metabolism protein 3,mH2A1,Histone H2A.y,H2A/y,Medulloblastoma antigen MU-MB-50.205
2E, J, M, R
(A, B, C, D)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.24Chemie (MES)
3F, K, N, S
(A, B, C, D)
SULFATE IONnon-polymer96.14Chemie (SO4)
4G, H, I, O, P
(A, B, C)
1,2-ETHANEDIOLnon-polymer62.15Chemie (EDO)
5L, Q
(B, C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
6T, U, V, W
(A, B, C, D)
waterwater18.0184Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 178 (UniProt: P47075)
PDBExternal DatabaseDetails
Ala 179-linker
Gly 180-linker
Ser 181-linker
A, B, C, D: 182 - 367 (UniProt: O75367)
PDBExternal DatabaseDetails
Glu 368-expression tag
His 369-expression tag
His 370-expression tag
His 371-expression tag
His 372-expression tag
His 373-expression tag
His 374-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight168939.7
Non-Polymers*Number of molecules15
Total formula weight1524.1
All*Total formula weight170463.9
*Water molecules are not included.

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PDB entries from 2024-11-06

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