5IIT
Structure of SPX domain of the yeast inorganic polyphophate polymerase Vtc4 crystallized by carrier-driven crystallization in fusion with the macro domain of human histone macroH2A1.1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Vacuolar transporter chaperone 4,Core histone macro-H2A.1 | polymer | 374 | 42234.9 | 4 | UniProt (P47075) UniProt (O75367) Pfam (PF01661) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) | Phosphate metabolism protein 3,mH2A1,Histone H2A.y,H2A/y,Medulloblastoma antigen MU-MB-50.205 |
| 2 | E, J, M, R (A, B, C, D) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 4 | Chemie (MES) | |||
| 3 | F, K, N, S (A, B, C, D) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 4 | G, H, I, O, P (A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 5 | Chemie (EDO) | |||
| 5 | L, Q (B, C) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 6 | T, U, V, W (A, B, C, D) | water | water | 18.0 | 184 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 178 (UniProt: P47075)
A, B, C, D: 182 - 367 (UniProt: O75367)
| PDB | External Database | Details |
|---|---|---|
| Ala 179 | - | linker |
| Gly 180 | - | linker |
| Ser 181 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Glu 368 | - | expression tag |
| His 369 | - | expression tag |
| His 370 | - | expression tag |
| His 371 | - | expression tag |
| His 372 | - | expression tag |
| His 373 | - | expression tag |
| His 374 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 168939.7 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1524.1 | |
| All* | Total formula weight | 170463.9 |






