Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5I4D

1.75 Angstrom Crystal Structure of Superantigen-like Protein, Exotoxin from Staphylococcus aureus, in Complex with Sialyl-LewisX.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BSuperantigen-like proteinpolymer34339193.62UniProt (A0A0D6GBT0)
Pfam (PF09199)
UniProt (by SIFTS) (Q2G0X7)
In PDB
Staphylococcus aureus
2C, DN-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranosebranched820.72BIRD (PRD_900122)Sialyl-Lewis X antigen, alpha anomer
3ATRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
4A, BTETRAETHYLENE GLYCOLnon-polymer194.22Chemie (PG4)
5B2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
6waterwater18.0641Chemie (HOH)
Sequence modifications
A, B: 31 - 356 (UniProt: A0A0D6GBT0)
PDBExternal DatabaseDetails
Met 14-initiating methionine
Gly 15-expression tag
Ser 16-expression tag
Ser 17-expression tag
His 18-expression tag
His 19-expression tag
His 20-expression tag
His 21-expression tag
His 22-expression tag
His 23-expression tag
Glu 24-expression tag
Asn 25-expression tag
Leu 26-expression tag
Tyr 27-expression tag
Phe 28-expression tag
Gln 29-expression tag
Gly 30-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight78387.1
BranchedNumber of molecules2
Total formula weight1641.5
Non-Polymers*Number of molecules4
Total formula weight759.8
All*Total formula weight80788.4
*Water molecules are not included.

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon