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5HRH

The crystal structure of AsfvPolX(H115F/R127A mutant): 1nt-gap(P) DNA2:dGTP ternary complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, B)
DNA polymerase beta-like proteinpolymer17820532.62UniProt (A0A0A1E3N6)
Pfam (PF01909)
Pfam (PF14791)
UniProt (by SIFTS) (P42494)
African swine fever virus (ASFV)PO174L, PolX
2B, F
(C, F)
DNA (5'-D(*CP*GP*TP*TP*CP*TP*AP*TP*GP*TP*GP*TP*AP*CP*TP*CP*AP*C)-3')polymer185457.52synthetic construct
3C, G
(D, G)
DNA (5'-D(*GP*TP*GP*AP*GP*TP*AP*CP*A*)-3')polymer92779.82synthetic construct
4D, H
(E, H)
DNA (5'-D(P*AP*TP*AP*GP*AP*AP*CP*G)-3')polymer82459.72synthetic construct
5I, L
(A, B)
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATEnon-polymer507.22Chemie (DGT)
6J, K, M, N
(A, B)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
7O
(A)
waterwater18.02Chemie (HOH)
Sequence modifications
A, B: 1 - 174 (UniProt: A0A0A1E3N6)
PDBExternal DatabaseDetails
Ser -3-expression tag
Gly -2-expression tag
Gly -1-expression tag
Gly 0-expression tag
Phe 115His 115engineered mutation
Ala 127Arg 127engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight62459.4
Non-Polymers*Number of molecules6
Total formula weight1234.1
All*Total formula weight63693.5
*Water molecules are not included.

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PDB entries from 2025-06-25

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