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5HQN

Catalytic domain of murine Acid Sphingomyelinase (ASMase, ASM, SMPD1)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Sphingomyelin phosphodiesterasepolymer47353640.62UniProt (Q04519)
Pfam (PF00149)
Pfam (PF19272)
Mus musculus (Mouse)Acid sphingomyelinase,aSMase
2C, E, H
(C, E, H)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
3D, F, G
(D, F, G)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched570.53In PDB
GlyTouCan (G21290RB)
4I, J, L, M
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
5K, O
(A, B)
PHOSPHATE IONnon-polymer95.02Chemie (PO4)
6N
(B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.21Chemie (NAG)
7P, Q
(A, B)
waterwater18.074Chemie (HOH)
Sequence modifications
A, B: 165 - 627 (UniProt: Q04519)
PDBExternal DatabaseDetails
Asp 155-expression tag
Arg 156-expression tag
His 157-expression tag
His 158-expression tag
His 159-expression tag
His 160-expression tag
His 161-expression tag
His 162-expression tag
Lys 163-expression tag
Leu 164-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight107281.2
BranchedNumber of molecules6
Total formula weight2984.8
Non-Polymers*Number of molecules7
Total formula weight672.8
All*Total formula weight110938.8
*Water molecules are not included.

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PDB entries from 2025-06-18

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