5HNM
Crystal structure of vancomycin resistance D,D-pentapeptidase VanY E175A mutant from VanB-type resistance cassette in complex with Zn(II)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... (A, B, C, D, E...) | D-alanyl-D-alanine carboxypeptidase | polymer | 197 | 22385.6 | 6 | UniProt (Q47746) Pfam (PF02557) | Enterococcus faecalis (strain ATCC 700802 / V583) | DD-peptidase |
| 2 | G, I, K, L, M... (A, B, C, D, E...) | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
| 3 | H, J, N, P (A, B, E, F) | SULFATE ION | non-polymer | 96.1 | 4 | Chemie (SO4) | |||
| 4 | Q, R, S, T, U... (A, B, C, D, E...) | water | water | 18.0 | 531 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 72 - 268 (UniProt: Q47746)
| PDB | External Database | Details |
|---|---|---|
| Ala 175 | Glu 175 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 134313.7 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 776.7 | |
| All* | Total formula weight | 135090.4 |
