5HMG
REFINEMENT OF THE INFLUENZA VIRUS HEMAGGLUTININ BY SIMULATED ANNEALING
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C, E (A, C, E) | Hemagglutinin HA1 chain | polymer | 328 | 36065.5 | 3 | UniProt (P03437) Pfam (PF00509) | Influenza A virus (A/Aichi/2/1968(H3N2)) | Hemagglutinin |
| 2 | B, D, F (B, D, F) | Hemagglutinin HA2 chain | polymer | 175 | 20154.3 | 3 | UniProt (P03437) Pfam (PF00509) | Influenza A virus (A/Aichi/2/1968(H3N2)) | Hemagglutinin |
| 3 | G, H, I (G, H, I) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G62182OO) | |||
| 4 | J, O, T (A, C, E) | N-acetyl-alpha-neuraminic acid | non-polymer | 309.3 | 3 | Chemie (SIA) | |||
| 5 | K, L, M, N, P... (A, B, C, D, E...) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 12 | Chemie (NAG) | |||
| 6 | AA, BA, CA, DA, Y... (C, D, E, F, A...) | water | water | 18.0 | 39 | Chemie (HOH) |
Sequence modifications
B, D, F: 1 - 175 (UniProt: P03437)
| PDB | External Database | Details |
|---|---|---|
| Gly 112 | Asp 457 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 168659.3 | |
| Branched | Number of molecules | 3 |
| Total formula weight | 1759.6 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 3582.3 | |
| All* | Total formula weight | 174001.2 |
