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5HDB

Integrin alphaIIbbeta3 in complex with Ro-435054

Replaces:  4Z7S
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Integrin alpha-IIbpolymer45449228.62UniProt (P08514)
Pfam (PF01839)
Homo sapiens (Human)GPalpha IIb,GPIIb,Platelet membrane glycoprotein IIb
2B, D
(B, D)
Integrin beta-3polymer47151958.82UniProt (P05106)
Pfam (PF17205)
Pfam (PF00362)
Pfam (PF18372)
Homo sapiens (Human)Platelet membrane glycoprotein IIIa,GPIIIa
3E, G
(E, H)
Monoclonal antibody 10E5 heavy chainpolymer21923612.32Mus musculus
4F, H
(F, L)
Monoclonal antibody 10E5 light chainpolymer21423332.72Mus musculus
5I
(G)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.81In PDB
GlyTouCan (G22768VO)
6J, L
(I, K)
2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.42In PDB
GlyTouCan (G42666HT)
7K
(J)
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.71In PDB
GlyTouCan (G81315DD)
8LA, M, N, O, Y...
(L, A, C)
SULFATE IONnon-polymer96.16Chemie (SO4)
9P
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
10CA, DA, EA, FA, IA...
(C, D, A, B)
CALCIUM IONnon-polymer40.111Chemie (CA)
11HA, U
(D, B)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
12KA, W
(D, B)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.22Chemie (NAG)
13GA, X
(D, B)
N-(4-carbamimidoylbenzoyl)-beta-alanyl-L-alpha-aspartyl-L-phenylalaninenon-polymer497.52BIRD (PRD_002217)
Chemie (5YB)
14AA, BA
(C)
CHLORIDE IONnon-polymer35.52Chemie (CL)
15MA, NA, OA, PA, QA...
(A, B, C, D, E...)
waterwater18.0742Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight296264.8
BranchedNumber of molecules4
Total formula weight2508.3
Non-Polymers*Number of molecules26
Total formula weight2666.3
All*Total formula weight301439.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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