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5HBM

Crystal Structure of a Dihydroxycoumarin RNase H Active-Site Inhibitor in Complex with HIV-1 Reverse Transcriptase

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AReverse transcriptase/ribonuclease Hpolymer55763989.21UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
Pfam (PF00075)
In PDB
Human immunodeficiency virus type 1 BH10 (HIV-1)Exoribonuclease H, p66 RT
2Bp51 RTpolymer42950096.51UniProt (P03366)
Pfam (PF00078)
Pfam (PF06817)
Pfam (PF06815)
In PDB
Human immunodeficiency virus type 1 BH10 (HIV-1)Pr160Gag-Pol
3A11-CYCLOPROPYL-5,11-DIHYDRO-4-METHYL-6H-DIPYRIDO[3,2-B:2',3'-E][1,4]DIAZEPIN-6-ONEnon-polymer266.31Chemie (NVP)
4A(7,8-dihydroxy-2-oxo-2H-chromen-4-yl)acetic acidnon-polymer236.21Chemie (F95)
5AMANGANESE (II) IONnon-polymer54.92Chemie (MN)
6waterwater18.02Chemie (HOH)
Sequence modifications
A: 1 - 555 (UniProt: P03366)
PDBExternal DatabaseDetails
Met -1-initiating methionine
Val 0-expression tag
Ala 172Lys 771engineered mutation
Ala 173Lys 772engineered mutation
Ser 280Cys 879engineered mutation
B: 1 - 428 (UniProt: P03366)
PDBExternal DatabaseDetails
Gly 0-expression tag
Ser 280Cys 879engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight114085.8
Non-Polymers*Number of molecules4
Total formula weight612.4
All*Total formula weight114698.1
*Water molecules are not included.

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PDB entries from 2024-07-17

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