5HA6
Crystal structure of human syncytin-1 fusion subunit
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Syncytin-1 | polymer | 117 | 13317.9 | 2 | UniProt (Q9UQF0) In PDB | Homo sapiens (Human) | Endogenous retrovirus group W member 1,Env-W,Envelope polyprotein gPr73,Enverin,HERV-7q Envelope protein,HERV-W envelope protein,HERV-W_7q21.2 provirus ancestral Env polyprotein,Syncytin |
2 | A, B | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
3 | water | water | 18.0 | 73 | Chemie (HOH) |
Sequence modifications
A, B: 343 - 435 (UniProt: Q9UQF0)
PDB | External Database | Details |
---|---|---|
Met -23 | - | initiating methionine |
Ala -22 | - | expression tag |
His -21 | - | expression tag |
His -20 | - | expression tag |
His -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
Val -15 | - | expression tag |
Asp -14 | - | expression tag |
Asp -13 | - | expression tag |
Asp -12 | - | expression tag |
Asp -11 | - | expression tag |
Lys -10 | - | expression tag |
Met -9 | - | expression tag |
Leu -8 | - | expression tag |
Val -7 | - | expression tag |
Pro -6 | - | expression tag |
Arg -5 | - | expression tag |
Gly -4 | - | expression tag |
Ser -3 | - | expression tag |
Ser -2 | - | expression tag |
Gly -1 | - | expression tag |
Gly 0 | - | expression tag |
Ser 405 | Cys 405 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 26635.8 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 70.9 | |
All* | Total formula weight | 26706.7 |