5GMG
Crystal structure of monkey TLR7 in complex with loxoribine and polyU
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Toll-like receptor 7 | polymer | 817 | 94014.7 | 2 | UniProt (B3Y653) Pfam (PF13855) In PDB | Macaca mulatta (Rhesus macaque) | Uncharacterized protein |
2 | C, D | RNA (5'-R(P*UP*UP*UP*U)-3') | polymer | 4 | 1179.7 | 2 | Homo sapiens | ||
3 | E, F | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 2 | In PDB GlyTouCan (G42666HT) | |||
4 | A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
5 | B | 2-azanyl-9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]-7-prop-2-enyl-1~{H}-purine-6,8-dione | non-polymer | 339.3 | 2 | Chemie (SDL) | |||
6 | B | PHOSPHATE ION | non-polymer | 95.0 | 1 | Chemie (PO4) | |||
7 | water | water | 18.0 | 33 | Chemie (HOH) |
Sequence modifications
A, B: 27 - 839 (UniProt: B3Y653)
PDB | External Database | Details |
---|---|---|
Arg 23 | - | expression tag |
Ser 24 | - | expression tag |
Pro 25 | - | expression tag |
Trp 26 | - | expression tag |
Gln 167 | Asn 167 | engineered mutation |
Gln 389 | Asn 389 | engineered mutation |
Gln 488 | Asn 488 | engineered mutation |
Gln 799 | Asn 799 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 190388.7 | |
Branched | Number of molecules | 2 |
Total formula weight | 848.8 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 2100.8 | |
All* | Total formula weight | 193338.4 |