5GJS
Crystal structure of H1 hemagglutinin from A/California/04/2009 in complex with a neutralizing antibody 3E1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Hemagglutinin | polymer | 329 | 36525.2 | 1 | UniProt (C3W5S1) Pfam (PF00509) In PDB | Influenza A virus | |
2 | B | Hemagglutinin | polymer | 182 | 20842.1 | 1 | UniProt (C3W5S1) Pfam (PF00509) In PDB | Influenza A virus | |
3 | L | light chain of human neutralizing antibody 3E1 | polymer | 214 | 23483.1 | 1 | Homo sapiens | ||
4 | H | heavy chain of human neutralizing antibody 3E1 | polymer | 222 | 23663.6 | 1 | Homo sapiens | ||
5 | C | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
6 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
A: 11 - 337 (UniProt: C3W5S1)
B: 1 - 176 (UniProt: C3W5S1)
PDB | External Database | Details |
---|---|---|
Gly 9 | - | expression tag |
Ser 10 | - | expression tag |
Cys 212 | Gly 219 | engineered mutation |
Cys 227 | Arg 234 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Leu 177 | - | expression tag |
Glu 178 | - | expression tag |
Leu 179 | - | expression tag |
Val 180 | - | expression tag |
Pro 181 | - | expression tag |
Arg 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 104514.1 | |
Branched | Number of molecules | 1 |
Total formula weight | 424.4 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 221.2 | |
All* | Total formula weight | 105159.7 |