5GJS
Crystal structure of H1 hemagglutinin from A/California/04/2009 in complex with a neutralizing antibody 3E1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Hemagglutinin | polymer | 329 | 36525.2 | 1 | UniProt (C3W5S1) Pfam (PF00509) | Influenza A virus | |
| 2 | B (B) | Hemagglutinin | polymer | 182 | 20842.1 | 1 | UniProt (C3W5S1) Pfam (PF00509) | Influenza A virus | |
| 3 | C (L) | light chain of human neutralizing antibody 3E1 | polymer | 214 | 23483.1 | 1 | Homo sapiens | ||
| 4 | D (H) | heavy chain of human neutralizing antibody 3E1 | polymer | 222 | 23663.6 | 1 | Homo sapiens | ||
| 5 | E (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 6 | F (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) |
Sequence modifications
A: 11 - 337 (UniProt: C3W5S1)
B: 1 - 176 (UniProt: C3W5S1)
| PDB | External Database | Details |
|---|---|---|
| Gly 9 | - | expression tag |
| Ser 10 | - | expression tag |
| Cys 212 | Gly 219 | engineered mutation |
| Cys 227 | Arg 234 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Leu 177 | - | expression tag |
| Glu 178 | - | expression tag |
| Leu 179 | - | expression tag |
| Val 180 | - | expression tag |
| Pro 181 | - | expression tag |
| Arg 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 104514.1 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 1 |
| Total formula weight | 221.2 | |
| All* | Total formula weight | 105159.7 |
