Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5GJS

Crystal structure of H1 hemagglutinin from A/California/04/2009 in complex with a neutralizing antibody 3E1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2014-09-19
DetectorADSC QUANTUM 315r
Wavelength(s)0.97914
Spacegroup nameH 3 2
Unit cell lengths130.162, 130.162, 365.853
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution47.980 - 2.900
R-factor0.2536
Rwork0.251
R-free0.30350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3lzj 3nfs
RMSD bond length0.011
RMSD bond angle1.353
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.000
High resolution limit [Å]2.9002.900
Rmerge0.1600.800
Number of reflections25201
<I/σ(I)>12.92.6
Completeness [%]93.8100
Redundancy6.56.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52930.1M MES and 16% PEG 550MME

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon