5FQF
The details of glycolipid glycan hydrolysis by the structural analysis of a family 123 glycoside hydrolase from Clostridium perfringens
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | BETA-N-ACETYLGALACTOSAMINIDASE | polymer | 610 | 70234.2 | 2 | UniProt (A0A0H2YNR7) Pfam (PF22680) Pfam (PF13320) In PDB | CLOSTRIDIUM PERFRINGENS | |
2 | A, B | 2-acetamido-2-deoxy-beta-D-galactopyranose | non-polymer | 221.2 | 4 | Chemie (NGA) | |||
3 | A, B | FORMIC ACID | non-polymer | 46.0 | 15 | Chemie (FMT) | |||
4 | water | water | 18.0 | 807 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 587 (UniProt: A0A0H2YNR7)
PDB | External Database | Details |
---|---|---|
Met -22 | - | expression tag |
Gly -21 | - | expression tag |
Ser -20 | - | expression tag |
Ser -19 | - | expression tag |
His -18 | - | expression tag |
His -17 | - | expression tag |
His -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
Ser -12 | - | expression tag |
Ser -11 | - | expression tag |
Gly -10 | - | expression tag |
Leu -9 | - | expression tag |
Val -8 | - | expression tag |
Pro -7 | - | expression tag |
Arg -6 | - | expression tag |
Gly -5 | - | expression tag |
Ser -4 | - | expression tag |
His -3 | - | expression tag |
Met -2 | - | expression tag |
Ala -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 140468.5 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 1575.2 | |
All* | Total formula weight | 142043.7 |