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5FP3

Cell penetrant inhibitors of the JMJD2 (KDM4) and JARID1 (KDM5) families of histone lysine demethylases

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BHUMAN LYSINE-SPECIFIC DEMETHYLASE 6B, JMJD3polymer51058050.32UniProt (O15054)
Pfam (PF02373)
Pfam (PF21322)
Pfam (PF21326)
In PDB
HOMO SAPIENS (HUMAN)JMJC DOMAIN-CONTAINING PROTEIN 3, JUMONJI DOMAIN-CONTAINING PROTEIN 3, LYSINE DEMETHYLASE 6B, JMJD3
2A, B3-(4-phenylbutanoylamino)pyridine-4-carboxylic acidnon-polymer284.32Chemie (YC8)
3A, BZINC IONnon-polymer65.42Chemie (ZN)
4A, BMAGNESIUM IONnon-polymer24.34Chemie (MG)
5A, BBICINEnon-polymer163.24Chemie (BCN)
6A, BCOBALT (II) IONnon-polymer58.92Chemie (CO)
7waterwater18.0835Chemie (HOH)
Sequence modifications
A, B: 1141 - 1643 (UniProt: O15054)
PDBExternal DatabaseDetails
Met 1140-expression tag
His 1644-expression tag
His 1645-expression tag
His 1646-expression tag
His 1647-expression tag
His 1648-expression tag
His 1649-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight116100.6
Non-Polymers*Number of molecules14
Total formula weight1567.2
All*Total formula weight117667.8
*Water molecules are not included.

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PDB entries from 2024-07-17

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