5FMZ
Crystal structure of Influenza B polymerase with bound 5' vRNA
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, D | POLYMERASE ACIDIC PROTEIN | polymer | 751 | 85822.8 | 2 | UniProt (Q5V8Z9) Pfam (PF00603) In PDB | INFLUENZA B VIRUS (B/MEMPHIS/13/2003) | INFLUENZA B POLYMERASE PA SUBUNIT |
2 | B, E | RNA-DIRECTED RNA POLYMERASE CATALYTIC SUBUNIT | polymer | 772 | 86207.0 | 2 | UniProt (Q5V8Y6) Pfam (PF00602) In PDB | INFLUENZA B VIRUS (B/MEMPHIS/13/2003) | INFLUENZA B POLYMERASE PB1 SUBUNIT |
3 | C, F | POLYMERASE BASIC PROTEIN 2 | polymer | 798 | 90844.1 | 2 | UniProt (Q5V8X3) Pfam (PF20947) Pfam (PF20948) Pfam (PF20949) Pfam (PF20950) Pfam (PF00604) Pfam (PF20951) Pfam (PF20952) In PDB | INFLUENZA B VIRUS (B/MEMPHIS/13/2003) | INFLUENZA B POLYMERASE PB2 SUBUNIT |
4 | H, V | 5'-R(*AP*GP*UP*AP*GP*UP*AP*AP*CP*AP*AP*GP)-3' | polymer | 12 | 3883.4 | 2 | INFLUENZA B VIRUS (B/MEMPHIS/13/2003) | VRNA 5' END |
Sequence modifications
A, D: 1 - 726 (UniProt: Q5V8Z9)
B, E: 1 - 752 (UniProt: Q5V8Y6)
C, F: 1 - 770 (UniProt: Q5V8X3)
PDB | External Database | Details |
---|---|---|
Gly -13 | - | expression tag |
Ser -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Gly 727 | - | expression tag |
Ser 728 | - | expression tag |
Gly 729 | - | expression tag |
Ser 730 | - | expression tag |
Gly 731 | - | expression tag |
Glu 732 | - | expression tag |
Asn 733 | - | expression tag |
Leu 734 | - | expression tag |
Tyr 735 | - | expression tag |
Phe 736 | - | expression tag |
Gln 737 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -8 | - | expression tag |
Ser -7 | - | expression tag |
Gly -6 | - | expression tag |
Ser -5 | - | expression tag |
Gly -4 | - | expression tag |
Ser -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
Gly 0 | - | expression tag |
Gly 753 | - | expression tag |
Ser 754 | - | expression tag |
Gly 755 | - | expression tag |
Ser 756 | - | expression tag |
Gly 757 | - | expression tag |
Glu 758 | - | expression tag |
Asn 759 | - | expression tag |
Leu 760 | - | expression tag |
Tyr 761 | - | expression tag |
Phe 762 | - | expression tag |
Gln 763 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -8 | - | expression tag |
Ser -7 | - | expression tag |
Gly -6 | - | expression tag |
Ser -5 | - | expression tag |
Gly -4 | - | expression tag |
Ser -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
Gly 0 | - | expression tag |
Gly 771 | - | expression tag |
Trp 772 | - | expression tag |
Ser 773 | - | expression tag |
His 774 | - | expression tag |
Pro 775 | - | expression tag |
Gln 776 | - | expression tag |
Phe 777 | - | expression tag |
Glu 778 | - | expression tag |
Lys 779 | - | expression tag |
Gly 780 | - | expression tag |
Ser 781 | - | expression tag |
Gly 782 | - | expression tag |
Ser 783 | - | expression tag |
Glu 784 | - | expression tag |
Asn 785 | - | expression tag |
Leu 786 | - | expression tag |
Tyr 787 | - | expression tag |
Phe 788 | - | expression tag |
Gln 789 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 533514.6 | |
All* | Total formula weight | 533514.6 |