5FBJ
Complex structure of JMJD5 and substrate
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lysine-specific demethylase 8 | polymer | 236 | 27318.9 | 1 | UniProt (Q8N371) Pfam (PF13621) | Homo sapiens (Human) | JmjC domain-containing protein 5,Jumonji domain-containing protein 5 |
| 2 | B (A) | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) | |||
| 3 | C (A) | (2S)-2-amino-5-[(N-methylcarbamimidoyl)amino]pentanoic acid | non-polymer | 188.2 | 1 | Chemie (NMM) | |||
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 5 | E (A) | water | water | 18.0 | 90 | Chemie (HOH) |
Sequence modifications
A: 183 - 416 (UniProt: Q8N371)
| PDB | External Database | Details |
|---|---|---|
| Gly 181 | - | expression tag |
| Ser 182 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 27318.9 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 399.7 | |
| All* | Total formula weight | 27718.7 |
